© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0398200.1
GAGCATATAGGCAGATAGCCTTTTGTGATTAAAAGTGCTAATTCTTCGCGGCAAATTGATCTCCCAGATTTCATTATTCAGAAAACGTGGAAGATTGATTGGACAACAAAAATAAATATACAGGTGAAGAACAAGACCAAGTACATACTTCTTACGCCGCCCATTTGGAGATGAAAGTAAGTGACCATGCACTTGTTCAGATCTCACCAAAATTACCAATCCACTTGATCCCGGCCGGGCGTCGCCGTCGGGATCACCGTCTTGATGGTCTCCTTCCAACCTTTTGGTGTTCTTCACAGGTTGCACCTGTTTAGTCTTCGAGTGTGATCAACGGCTTCGTCTTTAATTTCAACCTAACCAAGTGCTAAGGAGGTTAATTAATTATCCTTTTATTACCAAATGTTGTATCATAATATCTTGACAAGATTGTGCTCTTTGTAGAAAAGTAGGAGCTATACACAACTATATATCGTGTTTACATTTTTCCTTTTTGTAAATTATTGTTGTGTTTAATGTTGCTATACTTTTTTTCAAACTGAAATTATGCAAGTACTGTACTATGCAAAAAGAGACATAAATGCATATCACTATACACACCATGCACATGACATATATAAAAAATTGTCATGAACTTTTGTAAGTCCATATCAAGAAAAAGAACTCCCTAGTTTGTGTCAAAATTGTTCTTTTTTTTAAAAAAAATGTTCTCATCTTTAGCTCAACAAGACTAAGCTACAGTTCAAATACGAGGGCTTTAAAAAAAAACACAAATAGATGTCAGGTGATGAGGAACTGTTCGAGAAATTCTGTATCTAGAAAGGAACCTTTTGCAAAGTAGCAAACCATGCGTTAATCTCTCCCAGGATTAAAAGAAACCAATCACAAGCACTTTGGATTCATGCTACAAAAACTTTGGATTATTGAAGCAGCTAATAAGCTGACACATTCATAGTCAGCTGACATGGGGTCCTCCAAACATCTACTCCCTTCGTTTCACAATATAAGTCATTCTAGCATTTTTCACATTCATATTTATATTAATGAATCTAGACATATATCTATTTAAATTCATCAATATCAATATAAATATGGTGAATACTAGAATGACTTACATTGTGAAACGGAGGAAGTACTGAATACTGATGATATAGTAGCAGCACGTCGTTGAGGGCACATTCGTGGGCCCACGCGACTGTAATGTGTTGATTGTGTGTGTCTGAGTTCATCAAAAACAAAGTTTAGATTCAGTTTATGGCGCTAATCTGACCTTGCTATATATACGGAGGGGCATGGTTTTCTGTTAAGAGCGTAAGAGGCGCAGTAACACTATCTTTACAAAATCTCATCCAAAACTATATCAGCACAACCATTTAGAGGAATGAGGTTGCATCGCTGGTAAGACGTGCCAAATTGTCCCAAAAGCACAATGAGGTTGCCAGATTATCCAAAAGGCACAAGTAGACATCCCTCCCCTTGGTCAGTCATATTACTCTAGGCAACTTCAATCCCTTGCAGCACCTCTTCAACTCTAGTTTACCTGCTTAGAAGCATCAGTGAACTGTACAGGGAAAGTAATACTTTCCCTATATGAGTCGAAGAGATTATGAACTTCAACCTTCAGATCGACTGTCAAATGCATCCCTTTCAGGTATCCCCAACCAAGAGAAAGGAGGTGGTCTTCTAACTGGGATAAAGTAGAACAATCAATATCCTGAAAATCAATCACGTCCCCTCGTCTAATACCAAGCTTTTCAGCAGTAGAATCAACGAGCACCTGACTCACAATGAAACCACTGGTGATATTATAGTCACGACAGAGTTCCTCCTGAATGGAGACATCCAGTAGTTCCACTGACTTCAATTGCATGCCAAGCAAGGGGCGAGCAACACGGCTAAACTGATCCCACATCTCCATGCAAGTCATGATTGTCTTGATAGAGATAAAGACCGGACCCGGATTTTCTACAAATGCAATCCCAATCATATTGCCACCATGGTCAACCACCGGCCCTCCTGAACCACCCTCAGGAATATCACAGCTCAGAAACATATTGTGGTTCCTCAATAACACAGGGTAATCTGTCCATGAAATTGTTCCATGGCTAACCATTAAAGACATGTTTTCACCCCTACCCAATGCAAATATGACCTGACCGTAGTTTGTGCCCGATCCAAAAGAAGGGACCTCCAACTTGTAGTCTCCCATGACTTCCAAAAGAGCAATACCATAGTGCACATTGTAGAACAACAACCTTCCTTCTGTTGTTGTCTTATTTGGCATACTGACGGATAGCTTGAGTGCTGGGTTATGCAATTCACCATGGAAGTCACAAACAACAGAAGCAGCAGTGAGGATCTTGGCACGTTTGTTAGCCCCATCCCAACCGATTACGACGCCAGTGCACCGGGAAATCAATCCACCCCCATCAGGCATTGTGGATGAAACACTGACAACGGAGCGAGCCACACGCAGCACCATGGCCTTGTCTTGTGATGTGACGACGGCATCTGCAGTGATGGGATCCATGGGCGAATGCCTGAGAGTGGGGATATCTTTACATTGAGCTTTCTTGGAGAGTTTGGCGATCCGGCGGCGCTCCTTGGCCCACTCAAGAACGGAATCCAAATATTTTCTGTCAAGGACGGGATCCAAATATTGTCTGCTGGTAGGACGAGTCCCCGGTGGTAAGGTGGGATAAGGCGGGTAGCGAAGAGGGAGCGGCCGGGAGGCCAAGGTCGTACTACCGGCGGTGGTCATCTTCTTCGGAACCGGACCTGCCGCCGCTGCTGATGACGCCGCTGACTCTTCTGTCCTCTTTCTCTTCTTCGGATCCAGTGCCGTGCCCCCGCCACTAGCTCTAGCGCGCTCAGTAGTATCCCTCGCTCTAGATCGAGTAACACTTCCGGCGGTGGGAGCCGTAGCCGGAGCGGGATTCTTTTTCGATGTGTGGCTTTCTCCACCCTCGCCGGTGGAAGGGGATGGCGCCACCCCCTTCGACGACCTCAGTTTGGGTGGCATCGCCGATTCGCCGCTCGAGTTGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGCGGAGCTAGGTTTCTTTTCTTTTTTTTTTACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0398200.1 | 8 | 2508300 | C | T |
| Osa08LNT0398200.1 | 8 | 2508299 | G | A |
| Osa08LNT0398200.1 | 8 | 2511782 | A | C |
| Osa08LNT0398200.1 | 8 | 2508309 | T | C |
| Osa08LNT0398200.1 | 8 | 2507991 | A | T |
| Osa08LNT0398200.1 | 8 | 2508341 | A | G |
| Osa08LNT0398200.1 | 8 | 2508396 | G | A |
| Osa08LNT0398200.1 | 8 | 2508512 | C | T |
| Osa08LNT0398200.1 | 8 | 2508865 | G | A |
| Osa08LNT0398200.1 | 8 | 2510075 | G | A |
| Osa08LNT0398200.1 | 8 | 2510408 | A | C |
| Osa08LNT0398200.1 | 8 | 2511139 | T | C |
| Osa08LNT0398200.1 | 8 | 2511512 | T | C |
| Osa08LNT0398200.1 | 8 | 2512397 | C | A |
| Osa08LNT0398200.1 | 8 | 2512464 | A | T |
| Osa08LNT0398200.1 | 8 | 2512722 | A | G |
| Osa08LNT0398200.1 | 8 | 2513415 | T | C |
| Osa08LNT0398200.1 | 8 | 2513620 | T | C |
| Osa08LNT0398200.1 | 8 | 2513855 | C | G |
| Osa08LNT0398200.1 | 8 | 2514430 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0398200.1 | osa-miR529b | Cleavage | 2.5 | 13.937 | 1 | 21 |
| Osa08LNT0398200.1 | osa-miR1436 | Cleavage | 4.5 | 12.139 | 1 | 21 |
| Osa08LNT0398200.1 | osa-miR1439 | Cleavage | 3.5 | 12.276 | 1 | 21 |
| Osa08LNT0398200.1 | osa-miR2928 | Cleavage | 4.0 | 11.718 | 1 | 20 |
| Osa08LNT0398200.1 | osa-miR1862f | Cleavage | 4.5 | 13.296 | 1 | 20 |
| Osa08LNT0398200.1 | osa-miR1862g | Cleavage | 4.5 | 13.296 | 1 | 20 |
| Osa08LNT0398200.1 | osa-miR5508 | Translation | 4.5 | 13.84 | 1 | 21 |
| Osa08LNT0398200.1 | osa-miR818a | Cleavage | 5.0 | 7.456 | 1 | 22 |
| Osa08LNT0398200.1 | osa-miR818b | Cleavage | 5.0 | 7.456 | 1 | 22 |
| Osa08LNT0398200.1 | osa-miR818c | Cleavage | 5.0 | 7.456 | 1 | 22 |
| Osa08LNT0398200.1 | osa-miR818d | Cleavage | 5.0 | 7.456 | 1 | 22 |
| Osa08LNT0398200.1 | osa-miR818e | Cleavage | 5.0 | 7.456 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0398200.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0398200.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0398200.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Osa08LNT0398200.1 | 8 | cl8.1 | Morphological trait | Dwarf | RG20 | RG885 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)