© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0036400.2
GATACAAAAATATGAGGTGGTGTTTTTTATTACGTAGACGATCAAGATCCTTTTCGCGTGTATCCATTGCAACGCATCGGAGATGAACCGCGAAAACAAAAATTGAGTAGGATCGGTTCATGGCCTCAGCCGAATAGCGTAGCTACTGTACAGGTAAAGAATCATCAAAGGCATGCTATTTCTCACCATTTGCCGGCTTCTTTACATTCTCTCCGTGCTCCTTGGTGTTAACTGGCACAGGCGATTTGCTGGCTAGCTTATCAGCCTCTCTTGCGGCATCGATGTCCTTCTGGCTCAGGAAGCTGGGCTGGTTGGTCGAGGACAACAGCCTTGCCCACATCCTGTCGGTTATCTTAACCTTGTTTCTTGTTGATGTTACCCTGTGAAATGGAATGTATGCATGCCTGCCATTGACCATTCCAACTGTGAAGCTATATCCAGCCATTGCCCCATGAATGGCACTGTGCGCCAGCAGTGTGCAGTAGACATTGTCTGATGCATTGCTTGGAATTGCACGGATCATGTAGGTTGGATCTATATACTTAATAGTCATCTCCATCTTTTTGTTCTTGCAGTAATCCTTAATCTTGTGAGTCAGCCAAAGACCAACATCAAGAAGTAGCTTATTTCCAGATGCATCTATTTGATCTGCTGCAGCTATACTTTTGGCAATAAGATCCTGTCCTGCTCCCTCAGCTACAACAATAACCATGTGGTTGTTCTCTTTCAACCTCTTCTCTATGTACTCAAACAGTCCACCCTCCCCTTCCAAATAAAATGGTGACTCAGGAATTAAGCAGCAGTCCACGTCTCTGCTTGCAAGAGTAGCATACATTGCAATAAACCCACTATAGCGACCCATCAGTTTAACTAAGCCTATTCCATTCTCAGCACTTGAAGCCTCAACATGAGCTGCATCAATGGCACGCTGGGCCTCTTCTACAGCACTATCAAAACCAAAGGACTTGTCTATAACCGCTATATCATTATCAATTGTCTTGGGAACACCAGCAACAGCAACTTTTAGACCACGTCTACGAATTTCCTTATATATTTCATATGCTCCCTTCTGAGTTCCATCCCCTCCAATGATGTATACCTGATTAATACCACGATCTTGAATGTTGTCAACAATTTTTTTGGTGTCATGACCACCCCGTGATGTTCCCAGAACTGTGCCACCTCTTTTGTGGATATCATTGACACTTTTAGGTGTCATAGGAAGATAATTACTCGAATAGAATCCCTTGTATCCATTCTGTATGCCGAAGATATCATTGACATTGTACATGTGGGACAAGCCGCACACCAACTCTCTAATGACCGTATTTAGCCCAGGGCAAAGGCCTCCGCAGGTTACAATGCATGCTTTGACATCTTCTGACTCGAAGTACACCCTCTGACGAGGCCCAGCACGACGGAAGTGAACTCCTCTGGGACTGTCCTTCTGAACAACCACCTTTTCAGGTACAGTATCATCTGCATTGACAAAATACTGCTTGACGGTCGAATAGGCTGGATGATCTTGCAGTGGATTAGGAAAAGTGGGGAGATCGGAGAGGTAGTCCGTGAAGTGCGGGACGTCATCGAGGAGGTAGCCGTAGTCGCCCTCCTCGAGCTTGGCGTAGGCGGCGTCGTCGTCGGGGAGGCTCATGGCGGAGGCGTTCCGGAGGGCGCGGAGGTTTGGGTACGAGTCGCGGGAGATCCGCACGCACGTGGCCGAGAATGGCAGCGCCTTCGCCACCGGCGGCCCCTGCTGATGCTGGTACCCTGGCGCCGCCGGCGAGTCGTGGTCCTCCTCCACCGCCACGCCCAGCGCCGCCTCCTCCTCCGGACGAAACCGACGAGGTGGCCGGTGGGGAGCGGTTTAAATATTTCTCGGCGAAGAGAGGAGAGAAGCGAAGCGAAGCGTGGAGAAGGGGAAAGAAGAGCGGTTTCTGGTATGGTGGTTTCTGCTGCCAGCCGGCCGCCGAGAGATTAACGATGAGATGGCTGGGTTATGACTTAGAGCATCTCCATCAGTAGTCACTATTTTAGAGTCATCAAAGGTTAAATGAGGGCTGTCCCCATTTACTAAGAATTCAAAAATTATCTCCAACTCTACTAGCAGACCCTATTTCTTAGCCCCCATTTCTTTTTCTCTTGTATTTCTGATTATACTCTATGCTTACACCTAGTTTAACATAGTAATAATTCAAATACAAATATTTCTAATGCATAGAATTCAATTGTATTCAAATCCATAATTTTAAATATCATAATTCAAATTCAAAATTCTCAAACATGGGAGTGAAATCCTACCGGCAAGTATTCAAGACACTACGTAGTTCAATTAAATAAGAAGTATAATCAATAGATAAAATTAACTCTATACCTTTTCCAATCTAATCTATCTGAGAAACTTCAGAAAGAGCTTAAATCCTCCTAGAAAAAAAAAACCTTGAAGTTAAACTTCAACTCACAACTGACACAAAAGAACAACACTGCAGAATAATCTTTGAAGGAACTACTGCATAATTGCAAGCAGCCTAATTGTCTCAACCTACCAAGCACCACAAACTTTAAAGGAACAGAACAATA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0036400.2 | 1 | 30840402 | G | A |
| Osa01LNT0036400.2 | 1 | 30841298 | A | T |
| Osa01LNT0036400.2 | 1 | 30841788 | C | T |
| Osa01LNT0036400.2 | 1 | 30842630 | C | A |
| Osa01LNT0036400.2 | 1 | 30844322 | A | G |
| Osa01LNT0036400.2 | 1 | 30845198 | A | G |
| Osa01LNT0036400.2 | 1 | 30845368 | G | C |
| Osa01LNT0036400.2 | 1 | 30845490 | T | C |
| Osa01LNT0036400.2 | 1 | 30845506 | A | C |
| Osa01LNT0036400.2 | 1 | 30845607 | G | A |
| Osa01LNT0036400.2 | 1 | 30845187 | C | T |
| Osa01LNT0036400.2 | 1 | 30842395 | A | T |
| Osa01LNT0036400.2 | 1 | 30844804 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0036400.2 | osa-miR5143b | Translation | 4.5 | 19.971 | 1 | 24 |
| Osa01LNT0036400.2 | osa-miR5827 | Cleavage | 4.0 | 16.162 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395b | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395d | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395e | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395g | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395h | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395i | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395j | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395k | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395l | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395s | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395t | Translation | 4.5 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR167e-3p | Cleavage | 3.5 | 13.192 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR167i-3p | Cleavage | 3.5 | 13.192 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR169f.2 | Translation | 4.0 | 20.679 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395m | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395n | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395p | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395q | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395r | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR1856 | Cleavage | 5.0 | 14.358 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR2055 | Cleavage | 4.5 | 16.47 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR2868 | Cleavage | 5.0 | 12.155 | 1 | 20 |
| Osa01LNT0036400.2 | osa-miR2876-3p | Translation | 4.5 | 19.009 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR395y | Translation | 5.0 | 10.583 | 1 | 21 |
| Osa01LNT0036400.2 | osa-miR5143a | Translation | 4.5 | 19.971 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0036400.2 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0036400.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0036400.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0036400.2 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0036400.2 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0036400.2 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0036400.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)