© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0398600.1
ACATATAAAGAGCACTCTCCACGGCCAAGTTTAATTTTGGGGTGAAAAATGTCAAAAGATACATGACTTGCTTAGACTTCAGTCTTCAAACACAAAACAAATAACAAGTACCATGATGATGCTGATGGATAAAAGTTTCAAGTGGAAGAACAGCAGTAGTAAAAAGGATTTCCAGGAAGATTTGGTACTGGGCAGAGCAGTATGACCCACAGCAACTCTCATCTTTAACATATAAACTACAAACTGAACATGGGTTGCCGATCATGAGGATCTAATCACTGATCAGAGGACCATGCTCGTACATCTGCCCGAGCCCAAGTGCCGAACCTACCTAGTCGAAACGCTTGTACGGTTTGATAACAATTTCTGGCAGAGAGTTCGCATTGGCAAGTATAGCATTAACTATAGCAGGCACCCTTTTGTCGTCCTGCACACAGATGATTTTGACCTTCTTAAGACGCTCACAACTGAACGACAGGTCTGGCGTCTCTTCTTGTGGGTAACTCATCCACTGTTCCCAAGCCAAACCTTCAATCATTCCAAGATGCAGAGTGAGTTTCTCTATGATTGGTGAGCAACGAAGCAAGTAAATCAGCGCGCTTAGGTCAACATCCACATACCAATCATCGACAGACAGTTTTTTTAGGTTATTGAATGATTGGCACCTCCGGAGATCCCTTTTTAGTACCTCGTTTTGCCTTGAACGAAAAGAATCATCCTCATCCTCATCCTCATCATCGTATTCTTCATTTAGCAACTTCAATTTTGTTACATTTGACAAACCACTGAGGATGTTGTATTTCGTATCAAAACATGGGAAGGACATATCATCAAGGCGAATGTAGGCTTTTGCCACGGATGATACATTCACAAGGCAAGGAGCTAAAAAGGGAAGGCACTCCAGGTGGAGTGAAACAAGGCTCGGGGTATCTATCACAAGATCTTTATAATCATCGTGAACAGAATCACCATTGTCAGGGCTATGTGAGATAAAGGTTAAATTCTTCAAAGAGGTGGAAGAAAATCTGGTTGCATACACGCAACAATCTATCATCACAAGATCTTGCAATGCTGGACAGCCAGAAAAAAGCTTCTAAATAAAGAGGTCACTGATGGTAACATTACGAAGACGCAGTATTTTCAGATGGGACAATATGAAGGAAGAATGGTCTAGATCAAAATACTCAGAATAATGCTCACAGATGTGAAGCTCACGGACATTTCTCCTCAAAGCATAGCCAACCCACATGTTAGCGGTGTGATGGTTCAGGGAAACACTACCATGTTGATATAGCGTATACATGCGAAGGCTATCTAGAGGCACGCAACCACGGCGCAGTACCAAGTTGTCCATAAAATTCACAAATCCCATCTTGCTGGTGAATTCAGATGCTTTGATCTCGAGGCACTGTACAGATTTCCAAATGTGACGCCACCTAGTGGACAGCACGCATGTCTGTATGGCCTCCCGTGTAGTCATAAAACAGAGGATATGTTGCAGTGACTCATCAGGGAGGCTGCTGATAAAGTCATAGGTGCTGGCCTCTAGTACTGTTGGTCTCATACGCTTGTTAGACATTCTTATCTCCCAGTCTCATGGACAATTCACTCAAATATGTGGTGAACGATATACCCCTATCCAGCAGATGGAGATGGACCCGGGAGAAAAAGGGTTAGAGCTGAGGGTGCGCGCGCTCCGGTGCCACTTCCGTCTACCTCCCCGCGGCGGCGGGCGGCGCTCCGGCGAGAGCAACCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0398600.1 | 8 | 2910018 | A | G |
| Osa08LNT0398600.1 | 8 | 2909813 | C | A |
| Osa08LNT0398600.1 | 8 | 2909895 | T | C |
| Osa08LNT0398600.1 | 8 | 2910875 | T | G |
| Osa08LNT0398600.1 | 8 | 2911032 | G | A |
| Osa08LNT0398600.1 | 8 | 2911413 | A | T |
| Osa08LNT0398600.1 | 8 | 2912100 | T | C |
| Osa08LNT0398600.1 | 8 | 2912299 | T | G |
| Osa08LNT0398600.1 | 8 | 2912369 | C | T |
| Osa08LNT0398600.1 | 8 | 2911175 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0398600.1 | osa-miR5540 | Cleavage | 5.0 | 15.372 | 1 | 21 |
| Osa08LNT0398600.1 | osa-miR5825 | Cleavage | 5.0 | 16.581 | 1 | 24 |
| Osa08LNT0398600.1 | osa-miR1437b-5p | Translation | 5.0 | 15.313 | 1 | 21 |
| Osa08LNT0398600.1 | osa-miR531c | Translation | 4.5 | 14.395 | 1 | 24 |
| Osa08LNT0398600.1 | osa-miR531a | Translation | 4.5 | 14.395 | 1 | 24 |
| Osa08LNT0398600.1 | osa-miR531b | Translation | 4.5 | 14.395 | 1 | 20 |
| Osa08LNT0398600.1 | osa-miR1862f | Cleavage | 4.0 | 11.695 | 1 | 20 |
| Osa08LNT0398600.1 | osa-miR1862g | Cleavage | 4.0 | 11.695 | 1 | 20 |
| Osa08LNT0398600.1 | osa-miR816 | Cleavage | 4.0 | 14.418 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0398600.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0398600.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0398600.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Osa08LNT0398600.1 | 8 | cl8.1 | Morphological trait | Dwarf | RG20 | RG885 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)