© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0400100.1
GCCCTTATTGCTTCATGTATGTGTCCAAACATTTGATGTAACGAAATTTTTTAAAGTTTGAAGGGAACTAAACACTGCCCAAGTATCTGAAAGTCTCATACAGGTCAGTATCTACTGGGGTCCCTACAGTCAAATCCAAATCTAACTATCAGACAGGCTACTTCTGTACATTCAGCTACTGCCAGTGAAAGAGTCTTCAGCCTATTCGGCCCTCGTTGGATGCTCTGCCTCTGCCACCGAAAAAATGGACGTGTGATCTTGTGTTCCTGTGGGTGATGGGGGTGGCACTTCGAGTGCTTGAGCGGCTTTGCATCTCTTATCTATGCTGGCTCAGTCCGCTGTATTTCGTCAGGATGGATGGGCAGTCTTCATCGCATCGGCGACACATAACTTTGGTGTCGCCTAACTTTGGGGCAGACAAATGTGTTCATCTGGCTATGTATAGGGCAGAAGAACTGAGTGTGGATTCTACTTGGCAGCATACCAGCTCTTCGCGTACTTGGCGTCGACAGCTAGGTCAACCTTGAGGATGTTGGTTCCATAGAAAGGCTTGGACATGCACTCCACAACGATGGCCTTGGCCTCCTCGGCAGATTCTGTAGGCCCTTCCAAGATCACTTCATCATGCACCTGGCAGATGCAGACATAACATTTGAGGACAATGTACAAATTCATTCTGGGGATCAAAATAAAATACTCTGAAAGAACACAAAACGTAGCTCTTAAATATGATGTAAATCTTTGCTTCGCCAAATTCTTTGAAAGAAAGAAACAATGGTGGCCCCTTTCGTCTGTGCCTTCAAATACCAGCCTAAGTACTTCCTTTTGTAAACGTAGGAGTGTTATTGTCATAAACCTGCAATAGGAGTCTCCAACCAAGCTCCTTAAGGCGAGCGTTTCTTTCTATCTCAAGCATTGCACACATAGCAACATCTGCTGCACTGCCCTGCACTGGTGCATTTATAGCAGCACGCTCGACGTGACTCTTTTGACCAGGACCCGCATGAGTCATATTAGGAAATTGGCGTGATCGCCCGAGCAAAGTGTAGACTTCGCACTTCTCAAACGCAAGGGCTTTCTGCTTCTTTTGCCAAGCTGAAATTTCCTTTCTATCCCTATGCCAAAGTTTGAGTGTATCCCTTGCTTCCCTAACTTCAACATTCCAATCCTGAGATAGACCAACAGCAGTCTTCCCATATGCAATGGAGAAATTGAGCATTTTGGCCTTCCTCCTCTCAGCGCCAAAAGCATCCTTCAATAATGGCACTGGGGGTTTGTCTTGACCTGGTTGAGGATGCCATTCAAGCAGAACTTTCTTTTCTTCAACAGCATCACGAACATGCTGGTACATATTCATGGCTGTCCTAGAATGAAAGTCACCACCAGCCTTGAAAGCTTCCAGCATGCTTTTACAATTAGTAAGATGCGCCAAGATCCTCAGTTCCAGTTGGCCATAATCAGCAACAATAAGAGTGTTCCCTGGAGCTGCGACAAAAGCTTGGCGAATCTTGTACCTATCCTTTTCAAGAGCAGGTTGATTCTGCAAGCTTGGTGTTCTTGCTGACAAGCGTCCTGTTTCAGTATTGATATTTAACGAACAGTGAATGCGCCCTTCCTTACATGATATATGATCTCCCTGCAATGGAACAATGAAGCCGGATATCAATTTGTCAATAGAAAAGACTTCACATAGAGCAGCAATGGCATGACATGCTTCCCTTCCCTTCTTTCCTCCACCAAACGCTTCATATGCAGTTCCATATGGGGAAGTGTCTTCTATATCCTGCTCAGGAAGTTCCACACTGCTCCCATCTTCATCAAACTCTTGGCCATCATCATCAATTTTATATATATGATCTGTGGGTATTTTACCAGCCAAACTCCATAAAACGTCCCCACGGACTTTAAGCCAGCCAGTCTTTGTAGTCTTCTTGCCCTCTGTAGTGAAAAGTTTAAGATCTTCCACAATAGTGAAAAGTTTGATTGTGCGAGACTTTGGAATCTTCTTGCCCTCTGTAGCTATGCTTTCATCATTTGGCACTTTAAAAGCTTTACTTTGTGGCCAAGTTTCACCAGGCTTATTTCTATTTTTGATGCCACCAAAGAAAAGTTGGCGAATTTGATTATCACTATTCACATTCATGTACTTGGCATCAGGACAATGCTTAGATGCCCATTTCCGAAACTTATCCGCTGCTAATTTTCGTTCAACAACAGCAGTTTTCTCAATCTCCGAAAGGTATGCACGGTCAACAAACATTCCCTCTGTTTCCATCTTTACAAGAAGAGCACCAAAGGGACGCCAATACTCTTCGTAGAAATCATACATTGTTCCTCTAGGACAACCATCGAAAATCCATTCCTTTGCTTCAAGCTTGTTTTTCAAGCTTTCATAAAGCTTCAATGTACTCATTGAATCTAGTGAGGAATAGCAAATCCACAACTCTCTATCCTCCCTTTGTAACTTTTTGACTGGCTCGATAGATATGGTTTTCCCTTCAGATCCATTTTTTCTAACATTTTTCCGACCAAAAATAGTTTTCATTGACACCTTCCCAGTTTTATGTATGTCCTTTAGAACAGCATTCATGATTCTGTGATCATTTGTTAGTCCTTCAAGTGAATATCCACCATCAGCTCTCCTGGAAGAATCCCACAGGCGTGCAAGATGCATTGTATCAGCATGAAATCCAGCAACCTTGATTCCACAGTTCTCAATGACATGGCTATCAAAACTATAGTTATGCCAAACCTTTTTGATAGATGGGTCCTCAAAGAAAGGAGCAAACTCCATTAGAACATCCCTTCCACCATCTAGCACATCCACCCATATGCATGTTTTGCCATTTCCAAAATCAGCCTCCCCATCAGAATTTCCTGAATAGATGCTAAAGCATATTACTTCTCCATGACCAACTGGCGTCTCTTCTTTGACATCAATATTTGCCACCTCCGTGTCACATGCATGAATAAAGCCTTTGTACTTTGTAGTAAGCAATTTAACAACACTCCTAGCTGACTCAACATTGTCGACAACCAAAACTTTGTCATAGATGGTAGCAAGCAACTTCCGTGCATTTTTTGACTCAGTGGACAAGGAAGCTTTGTCCGGGATATTTAGCGTCACTTTCCTTGTAATGCGTTTGTGCTCCTTTTTGTTTGGGATAGCTTTATCAACCACCAAAGTTGTCTCTGACTTGGAAACTTTAGGCAGAGAAGATTCCACCGTAACGGAATCGTGCCAAGGAATTTCCTCCTTGGAGCCATCAAGCAGGTTCAGTGGTTTGATATCATTATTAGCAACACTGAATGGGGCAGGCACAGCATGTGCTGACTGATACATCACACGATGCTTAGCCAAATCTGTATCGACATGTCTATTTACAATTGAATTAGATGGCCCTCTTTCTCTTTGATTATACAAGGAAGGATAGTTTGAACTCCTGATATCTTCTGAGGGATCATGACGCAGATTTCCAACCCGCAGAGGAGTAGTGCCATTAGTGATGTTGTTCCTGACATTGTTGGTGGTCCTGAGGAAAAATAACCTCTTGGTTTCATCAACCCATTCTTGCACGCTACTTTGTACATTTAAGTTGCCATGCAATCCCAGCCTGAAAGCACCAGTTTTGCTAACCCCCATGCCAGAACTAGGAGAATAATCTTGCCTGCCAACGAGAACCATTTGCAATGTTCAGTAGCACCCAAGATCCCAACCAATGTGAAATCATCAACTAGTAAGGCAAAAGCGCGACATTCAGGATAGTGACAGTAGAACCCAGTTACTCTTTGGCAGATTACTATTATCGGGCAATTCGTACTTCTGTAGTAATAATCGTATGTCTATAAGAAGTGGAATGTGACTATATAAGGAATGCTTTAGATCTCTTAATACAAAACAAAAAAAGTATATAAGGAATGCAAATCAACACTAGCTCAAATGAGGAGACGTATCCGAAGTCCTACACAGTCTAAATAAATCATCACATTAGAACACGCGAAAAAGATGCATACACCCATCCATTAACCAAAACATCATCTATTATTTTTCATCACGAATTAGGCACTACGGAACAGAGCTTTCTCCCACCTCCATGATAGGGACATCTTAACAAATAAACATTACGGCTACCTTCCTCCCGCGGCGAAGGCCGGGCGCGAAAAGTAGCGGGTGCGGCCGAAGGAAGAGGACAGCCACGGCGACGACCCCTGCCACCGCCGGAGCAGCCGCGCCGGTGCCGGCGGCAGCGGCGGCGCCACCGCCATGGACCTCACGAGCCGCCTCAGCTTGGACCCGGCCCGCCTCCCTCCTCCTCCCGCAACGCCACCACCCACCCCGCAACCGAAGCCGCAGGGCGCCGTCTTGCACCGACGCTAGGGTAGGCCGCTGCAGCAGCAGGCGATGGCCTCGCGGCGGCGGCCGGAGGCGGAAGCGAGGGGAAGGAGAGAGAGGGTTTGGGAGACAAGGGGAACGAGGGTTTAAGAGCATCCCAGCAGATCCTCTATTTGGTACTCCATCCGAAATATAGCGCATATGGGAGGAGAAATCGTCGCTCCAGCAGATACGGGCATCGAGGCTTCCAAAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0400100.1 | 8 | 4407445 | A | G |
| Osa08LNT0400100.1 | 8 | 4411120 | A | G |
| Osa08LNT0400100.1 | 8 | 4409546 | C | A |
| Osa08LNT0400100.1 | 8 | 4413249 | G | A |
| Osa08LNT0400100.1 | 8 | 4406907 | G | A |
| Osa08LNT0400100.1 | 8 | 4407425 | C | A |
| Osa08LNT0400100.1 | 8 | 4407636 | C | T |
| Osa08LNT0400100.1 | 8 | 4407682 | C | A |
| Osa08LNT0400100.1 | 8 | 4408030 | C | T |
| Osa08LNT0400100.1 | 8 | 4410529 | T | C |
| Osa08LNT0400100.1 | 8 | 4411594 | G | A |
| Osa08LNT0400100.1 | 8 | 4411652 | A | G |
| Osa08LNT0400100.1 | 8 | 4411816 | T | C |
| Osa08LNT0400100.1 | 8 | 4412122 | A | G |
| Osa08LNT0400100.1 | 8 | 4412282 | T | C |
| Osa08LNT0400100.1 | 8 | 4412792 | A | G |
| Osa08LNT0400100.1 | 8 | 4412939 | A | G |
| Osa08LNT0400100.1 | 8 | 4415124 | C | T |
| Osa08LNT0400100.1 | 8 | 4415601 | C | T |
| Osa08LNT0400100.1 | 8 | 4416644 | G | A |
| Osa08LNT0400100.1 | 8 | 4412314 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0400100.1 | osa-miR5531 | Translation | 4.5 | 12.35 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR5535 | Translation | 4.0 | 22.272 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR5542 | Cleavage | 4.0 | 19.509 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR5179 | Translation | 5.0 | 23.572 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395b | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395d | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395e | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395g | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395h | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395i | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395j | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395k | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395l | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395s | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395c | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395u | Cleavage | 3.5 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR399d | Cleavage | 4.5 | 9.978 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR399i | Cleavage | 4.5 | 9.978 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR399j | Cleavage | 4.5 | 9.978 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR529a | Cleavage | 3.0 | 23.903 | 1 | 20 |
| Osa08LNT0400100.1 | osa-miR395m | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395n | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395o | Cleavage | 3.5 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395p | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395q | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395w | Cleavage | 4.0 | 13.513 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR395r | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815a | Cleavage | 4.5 | 15.188 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815a | Translation | 4.5 | 14.624 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815b | Cleavage | 4.5 | 15.188 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815b | Translation | 4.5 | 14.624 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815c | Cleavage | 4.5 | 15.188 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR815c | Translation | 4.5 | 14.624 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR1850.3 | Cleavage | 4.0 | 15.658 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR1854-3p | Cleavage | 4.5 | 24.61 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR1846a-5p | Cleavage | 4.5 | 19.024 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR1846b-5p | Cleavage | 4.5 | 19.024 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR1846c-5p | Cleavage | 4.5 | 19.024 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR2094-3p | Cleavage | 4.5 | 13.667 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR2095-3p | Cleavage | 5.0 | 14.829 | 1 | 20 |
| Osa08LNT0400100.1 | osa-miR2118h | Translation | 5.0 | 23.775 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR2118k | Translation | 5.0 | 23.775 | 1 | 22 |
| Osa08LNT0400100.1 | osa-miR2863a | Cleavage | 5.0 | 23.413 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR2874 | Cleavage | 4.0 | 15.419 | 1 | 24 |
| Osa08LNT0400100.1 | osa-miR2878-5p | Cleavage | 4.5 | 9.902 | 1 | 24 |
| Osa08LNT0400100.1 | osa-miR2922 | Cleavage | 4.5 | 14.26 | 1 | 20 |
| Osa08LNT0400100.1 | osa-miR395y | Cleavage | 4.0 | 13.513 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR3979-3p | Cleavage | 4.5 | 11.986 | 1 | 20 |
| Osa08LNT0400100.1 | osa-miR5486 | Cleavage | 4.5 | 20.396 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR5515 | Cleavage | 2.5 | 10.258 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR5518 | Cleavage | 4.5 | 17.847 | 1 | 21 |
| Osa08LNT0400100.1 | osa-miR395u | Translation | 5.0 | 18.412 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0400100.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Osa08LNT0400100.1 | 8 | qRRE-8 | Resistance or Tolerance | Other soil stress tolerance | C166 | C1121 |
| Osa08LNT0400100.1 | 8 | nan | Physiological trait | Flowering | C166 | C1121 |
| Osa08LNT0400100.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0400100.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Osa08LNT0400100.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0400100.1 | 8 | nan | Morphological trait | Panicle/flower | RG333 | RZ562 |
| Osa08LNT0400100.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)