© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0401900.1
TTGGACAGCATGTATGACATAATATTGAATAGCATGTGGTTCACAAAATACCTCACATAACAATGGTTCACAACATAACAGTGGTTCACATGCACCATGGTTCACAACATAGTAGTGGTTCATATGCACCATGGTTCACAAAAGACCTCACATAACAGTGCCTCACATGCACCAACAACAAAGGTGGTTCACATACACCAACATGGTTCACATGCACCATGGTTCACAAAATACCTCCTATAATTGTGCCTCACATGCACAGCACACAATATTAGTTGTGATACAGGAGGAGCTATTCAAGTAGGCTTCATTTTCTTGGGTGTGAGCTTCTTTGTACATGTCCTCTTTGATGGAGCCGGCTGTGAGCTTGATTCAGCAATATTCACCCTCCTTTTACATGTCACTTGTGAAGCAAGTGCCGGTTGTGAGCTTGTCCCTCCTTGTTCCATTAACATTGCAAGCCGGCGTCTTGTCACAATTGTTGGGCTTTCTTGAATAATGGTTTCTACAGTAGGCCTAGTTGGGGTATATGGTATAGGAGCAGCATGAGCAGCAGGAGCAGCATAAGCATCAGGAGCAGGGGCATAAACCACATCAGGAGCATTAGGAGCAGGAGCCGGCCCATACCTCGTTGTGTTCCATCTTGCCTTTCGTTTCGGCTTCTTCTTTGTACCATTGAGCTTACACTTGTAGCTAGTTTGTCCATGACCCAACTCACCACATTTTTTACACCTTTTTCCTCTAATCGTTGCCTTCTCTTTGGCATTGTCTTTAGGCTTGCTACCACCACCTTTCAAGCAACCCTTGATCCTTAGTTTCCTGTACCTTCCTAGGTTCCTTTTTGCAAGGGGTGCACCAAGAACAAAAGGTAAATCCACCTTAGGCCATTGTGATTTGTCAGGGAGTGGCTCAATAATTGAGTTGTATGCATTCCAGAATAGGGCCACAGAGTAGTAGGGATTAATGTACTTCTCCAACTTTACATCCCTAATTTGCTAGGAGGTAATCACTGCCAAGGCATGTCGGCAAGGCTTGCCAGTGTGTTGCCACTCCTGACATGTACAAGACTGCTCATGTGTCCTCACAACATGCCTAGCATGGCTGCTACTATTGTCCCAAACCTCAGCAGTGGTTATGTCAGCATGCACAACTGACAAGTGGCCTAACCCTCGAGTCCTAGCTCTCAACTGGTGCAAATTAGCAGGTAGAATTGTACCTGTGAATTTATTTCCAATCCTTCTCCTCCTATTCCACAGGGTCATTATCATCTCCCTACATGTGTCAGCAAGCTCACAAATAGGTAAGGCCTTTATATCTCTGATCCAATTGTTAAAGCACTCTGCAAGATTGTTAGTGACATAATCACATTTAATTTCAGCATTGAAGCCACTCCTGTACCATATCAATTTATGGCAAGTGTCAAGCCAGAGAGCCACATCAGTGCATGCTTTCTTAATTGTATCCATACACTCCTCGTGCACTTGTGCCCTATATGATCTAGCTGCAGGATACATCTCTTGGAAGACAGATCCACCATATTTCTTGATTAGATTTTGCATAAGGTGGTTAAAACATTCTCTATGTTCAGCCCAAGGGAAAACTCGGTGCACTGCAATCTCTAGTCCTTTGCATGCATCAGTACAAATTGCAAGAGGAGATACTTTTCCTATGGCCTTAAGCAATTGAATCATAAACCAGGTCCAATTATCAGTAGTCTCAGCATCAAAGAAACCAAAAGCAAGAGGGTACATCCAGTTGTTTCCATCTATAGCTATGGCAGATGCTAAATGTCCTTTCCACAAACCATTTAGGGCAGTTGAGTCTACACTAAGGTATGGCCTACATCCAGTTAGAAATCCAGTAATGCATGGACTAAATGCACAAAAGAATCTGTTAAAATAAACCTTCCCATCAACCTCAACAGTGTCAATCTCAATAACACTACCTGGGGACCTCTCCATGACTGCAGCCCTCCACCTATACAACATATGGAAATTCTCTTCCCAACTACCATGCAATTGGATCATAGCCAAACTCCTACCCTTAGCCACAGTATCATAATTGATTTTGCATTTCTGATCCTCTTGCAACCTTTTTTGCAGTTCTTTAGGGCCCATACCTGAATCTGTCCCAAGGATATGGATGGCCTTGGAAGCAACCCAGGCGCTGGTTGGTGTGGTAGTCTTCCTTCTACCGCTAGATGTACACGTGTGATGATTAGTAAACTTTGTCACCATTACGGTTCGCTCGTCAGCCTGTCTACGCCCATTCACATGCCAAGGGGAATCACTTGCCCCTTTGCATGCTCCTACATATTTTTTACGATCTGTCGCCTTTACCCAAAGTTCAAACTCCTCATTGATGGCAAACTGTCTAACCGCCAATCTAAAGACCTTCATGTCGGGATACACAGTTCCTTTGACCAAGGATGGCTTATTCGCGTCATTCACCATCATTCTTTCTCCGGCAACCTCGTCCTCGACCGGAGGCTCAACCTCAACCTCATTTTCATCGTGATTCCCATTTTCAGCACCATTGCCATCGTTACCATTACCCTGTTCAGTTTCAGCCGCCGCTCGGAGCATTCTCGGCGGCTTCATCCTCAGCCCTCAAACCCAAAAGCACGTACAACTGGTCATCATCTACGATGTTTACCCTTCCTTCCTCATCTAACGGTTCGATAATCTGTAGGTTTTCCCAATCAACAATAGGTGGTGGATGTGGTTCTGGCTGTGGCTGTTCTCCTTGAGTAGGAGGAGAACTACCACCACTATCAGGTTCATCAGTAGGCGATTGTACAACTACTAATTGACTCCCAGGCTCCTCCTCGAGCCTCCCAACAATCTGTAGCCAGGTGGAGTCATCCATGGAGCCAAACCCTAACCACACATTGAGGGAGGGGAGGAGGGAGTGGAGGGCGGGAGGAGCTGACCGAGGGGCAGCGGTGGATGGGGGCGGCGGATAGGGGTGGGGGTGGCGGCGGATGGGGGCGGTGGCGGAGGCGGATGGGGGCGGCGGCGCTGACTGGGGGAGGACGAGGTGGGGGAGTGGCAGGGGCGGGGGCCGGCGCCGGAGACGAAGCCGATGTGGAGGCACGCTGGTGTCGCCTCTGCCGATGCCGCTCCCAGCTTCTCCCTCCTCAGTCAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0401900.1 | 8 | 5522054 | A | G |
| Osa08LNT0401900.1 | 8 | 5521379 | T | A |
| Osa08LNT0401900.1 | 8 | 5521646 | C | A |
| Osa08LNT0401900.1 | 8 | 5522103 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0401900.1 | osa-miR5526 | Cleavage | 4.5 | 14.277 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR5791 | Cleavage | 4.5 | 13.628 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR5791 | Cleavage | 5.0 | 17.416 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR5827 | Cleavage | 4.5 | 19.588 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR2873c | Cleavage | 3.5 | 13.138 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR5837.1 | Cleavage | 5.0 | 20.323 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR6253 | Cleavage | 5.0 | 7.59 | 1 | 22 |
| Osa08LNT0401900.1 | osa-miR167d-5p | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167e-5p | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167f | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167g | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167h-5p | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167i-5p | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR167j | Translation | 4.5 | 19.774 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR396e-3p | Cleavage | 3.0 | 16.773 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR444a-3p.1 | Cleavage | 4.5 | 20.682 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR528-5p | Cleavage | 5.0 | 15.198 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR1430 | Cleavage | 5.0 | 24.025 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR444b.1 | Translation | 5.0 | 13.673 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR444c.1 | Translation | 5.0 | 13.673 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR444d.1 | Cleavage | 4.5 | 20.682 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR1853-3p | Cleavage | 4.0 | 17.028 | 1 | 22 |
| Osa08LNT0401900.1 | osa-miR1854-5p | Cleavage | 4.5 | 12.068 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR1865-5p | Translation | 4.0 | 24.901 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882a | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882b | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882c | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882d | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882e-5p | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882f | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882g | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1882h | Cleavage | 3.5 | 19.571 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR1846e | Cleavage | 4.5 | 19.001 | 1 | 20 |
| Osa08LNT0401900.1 | osa-miR396f-3p | Cleavage | 4.5 | 16.773 | 1 | 24 |
| Osa08LNT0401900.1 | osa-miR5492 | Translation | 5.0 | 15.8 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR5517 | Translation | 5.0 | 12.921 | 1 | 21 |
| Osa08LNT0401900.1 | osa-miR1874-5p | Cleavage | 3.5 | 23.879 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0401900.1 | 8 | hd8 | Physiological trait | Flowering | RZ562 | RG978 |
| Osa08LNT0401900.1 | 8 | nfb8 | Morphological trait | Panicle/flower | RG108 | RZ562 |
| Osa08LNT0401900.1 | 8 | nfb8 | Morphological trait | Seed | RG108 | RZ562 |
| Osa08LNT0401900.1 | 8 | dth8 | Physiological trait | Flowering | RG333 | RZ66 |
| Osa08LNT0401900.1 | 8 | qALRR-8 | Resistance or Tolerance | Other soil stress tolerance | RG978 | C1121 |
| Osa08LNT0401900.1 | 8 | qDSR 8 | Resistance or Tolerance | Other soil stress tolerance | RM3572 | RM404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)