>Osa08LNT0412300.2

ACATGCCATATGTATTTCAAATAAAAGAAATACATTGTACAGATTACATAGCGATCTGAGTTTCCTTGCAATTTGACCAAAAATGCGGTCCAAACTTACAGCATATGGACTACAATCCTTGCATACTCCTAAGAGTATACAGACTACATTGTATGGATTAACAGCGAAGGCTACATTCATCAAACTACAATCCTTTTAGCACCATCCACTTCTGCCTGCTGTATTTACCATCCTTTTAGGCAATCAATTTTTCTCTTTTGTATTTTGCACAAGGTTACAATAGTTCTCAGGATAACTTGACATCTGGCAAAACTAGTTCTCAGGATACAAGGTGTTCTGAATCTTTACAAACTCCTAATAGTGTATATACTACATAGTAGGAATTACAAAGAAAGGCTACATTCATTATCTTGTCATTGATTGTTCTATGTCATTTCTTCAGCATCCTCTCATTCATGCTCTTCCAATCTTCAATTGCCATTCATGCCGCACCCCATATATCTCACCTGCAATTCTGCATTGGCCTCCGCAATGAAAACCAAAACCGAGCAATCAAACTATGAAACTCAATGCACGGGAGGGTGTCGCCTGGCCCTTCCACTGTCGCTGCCCTGCTCCAGGCATGGGAGGGCGCCGCCACTGCCCTGCTCCAGGCACGGGAGGGCGCCGCCACTGCCCTAGCTATCCGAGGGAGCCGCCGCCGCATTCCATCTCCATGCGCCCAACAGCGGATGAGAAAGGGGCGACGGGATAAGAAACAGGCGGAGGGGAACGATGACTGCATCTCGGACTAGATCGAGCCGATCGGAGCGAGCGCGAGCCGAGTTGTGGTGTGTTGAGATCGCTCTTGAGCCGAGCTGAGATTTAGGTGCGATGCGGACTCGCTTGTGTGGGCCGGCCGTCGGATGAGCGCCCCATCCACGCGTCATGCATCCGCGTCGGGGCTGCACGGACTGCTGTTTGCATCCGGTCTGCACCAGATTTTTTTCCGGACCGGCTGGCCTCGATCTGGAGGGCAAAGGTGCGCCGGCTGACTGCTTGCTGCTTGATATTTGCTTGTTGGATTTGGATGACTGGATCTATTTGCTGCGCTTGATGATGGCGTGCTGATGTTGTTGCTTGGACCTGAAGAGGGATGATGAATGACGAGGTAGAGGCTAGGCAGTAGGCTGTTGTTGCTCTCAGGCTGCTGCATCCATGACGATGGGCTTATGCTGCTGCTTGATGATTGACCCAAAATTGCTGCTCCTGCTTGATGCTCAGATCGACGAGGCCGCCCCTGGGAAGCAAGATTTTCCCTCCCAGGGGCAGCGTGGCTGAGAACGTAGATGGAGATTGGATCAAGCAACCCAGTGCTCTGATACCATGTTAACTTTAGTGGAAGAGAAGAAATGGGGATTGAAC

Explanation	CPC Score
noncoding	-1.07284

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0412300.2	8	18466482	G	T
Osa08LNT0412300.2	8	18467644	G	T
Osa08LNT0412300.2	8	18467820	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0412300.2	osa-miR416	Cleavage	4.5	18.15	1	21
Osa08LNT0412300.2	osa-miR1873	Cleavage	2.5	16.25	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0412300.2	8	qCRE-8	Resistance or Tolerance	Other soil stress tolerance	R727	C347
Osa08LNT0412300.2	8	nan	Resistance or Tolerance	Drought tolerance	RG978	RZ66
Osa08LNT0412300.2	8	dth8	Physiological trait	Flowering	RG333	RZ66

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus