© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0441800.1
TATTAATCTACATCCCAAGCCCCCTGTATCAATAAATTGCTTGGGCAATCCTCTCCCTAGCCGCCCTTCTAAGTAAAACGCTGCCATGGCCCTCTCCAGGGCCATGGTCAACCTCCCCAATCGTCCTACGCTGTTCTGTTAACTTCCTATTACTACTACTAATGTTGCTACTTCTACTACTATCGTGGTGTTTACCTTGGTTGGAATAGAAGAATGGCATCACATCACCCTCATCCCAGCCCCCTCTGCCGGCCTGATGCTGGTGCTGGTGCAGCATCTCAACCTCAGCTGCTTGATCCACATATTGACTTGAAGTGCTGGGGTTCAAGCTAGACCTCTGCCGCGAATAGCTAAGTTCATGTTCCTCAGGTATAACCACCGTGCTTACAGGGTACATTTGATCCGAGCTTCCAAATATGTAATCATACTCCTCCATGCTGGTCGAATTCCTTGTGCTGTCAGTGCTATCACTACTGAAAGTGCTGGTTGACCCTGCATCAGAGTTGCTGAACAGCGAGGAGCTGTCACTTGGACTCGGGGACTCCACTACTGTATAAGATGAGCCACCGAATGTGTAGGTGAGGTCATAGACTATATGATCTCTACATGACTGCCCACCTTGGTGTCTGCTTAAGTAACTTCCTCCTTCCAAAGATGGTGGTCCTGGATCCACCATCTGCTTGGCTTTCTTTGTGCACGATGAGTCTTGAGCAAGAATCATTTTCCTTACAGAGTTTGGTGCCCGTGGTGAACACCTTGCGTAAAATAGCATGTATGCACACTTTGACAAGACTTTTTCCAGAGAAACAGGTTTCACCTGGCTGTCATCCATCTTGTGCCACTTCCCTTGTGTGTCTTTGACATAACACACATAATGGCCAGAAAAGGCTGCATTCATAACATCATGATGGACAACCACAGCATAGAGCTGGTACACGGGGGAAATATCATCTGCTGTACTCATGTAGTTAGACAAATTCAAGTACTCCGTGAACCTGACAGCCTTGTTGATCTTGCCAAAATTACCAGACTGATATCTTTTCAGCGCAATAGTCAGGATGTTTGGTGCTTCTGATATTGTCAACTTCTTTTTGGCACGTTCATATGACTTGCATCTGCTGCAATTGTATCTATTATCACCATCTAAAATTTCTGTAGATGTAAACCGATGAAGTGCTTCTTCAAGGGTATTGATATCCCCATCTATTTCAACAGTAAGATCCAAAATGCGTTCACATTGTTCTGAACTGCCTTGACACATTGTGCATTTTATCTTCGATCGTAGATAGCCCCCAAATATTAACTGCACCAGTGTTGTTTCTTCAGGCAGCCCATAAACACCGTTTTTCTTGGCTTCCTTCATGCTAGCAGATTGCATAGTATCAATTGCATACCTGAGAAATTCATGAGCATCTTCTTCTCTACCGGGGCCAAAGCTACTTCCAATGTCACGCAAATGAGATAGTATTCCAGTAGGTGACAAGTGAGATTTTCCTCGCCTACCCTCCAGAATGAGTTTTTCAAACTCACACATGAAGCACCATTCCTTTTTGGAACAATTTCTTGAATGAAGTCCTTCCGTAAGGTATGCTGTAAGTGGCCGCGTAAATGCCAAGCACTGAAGAACAGCATTTGCGTAACAACTATTCCCAAGGTTCACAAGACCAAAAGGGCGCAGCTCCACCTTGTCAAAATTGTAGAGCTTGACAAAATGTTCATACGGAAAAAGTGTCATTTCCGATGGATAATGCCTCACAACTTTTGCAGCTGCTTGTTGCCTGGGAATATTCTTTACCAATGACCGATTATTTGGCATAGCAGCTTCTTTCTCTGATCCATGAATAGAAGAAATTGTGCCAACAGTTGACACAGATGGCAAACCTCTCGAACTTTTAAGGTTGTCTGTGCCAGAAGCCTGTTTGTTAGAATGGTTCAGTTCAGGTTCCGACGTGGTAGACCGTTCAACTCGAGAACTGGAGCTGCCTGCTGAAGTCTTAGAGAAATTCTCATTAACAGTAGCATCCTGAATATTGCAAGCTTTACCAGAAGTTGGGAGCCTAGAACTATCAACAGATCTAATCCTATTGTTGTCAAGGACATCCTCAGAAACCTTTGCAGTAATAGATGCCTTCTGACCTCTCATCTTCTTTCTTTCATTATCTACACCATCGGAGACAAGGTTTGCCTCAGACAATTCAGGCACAGCAGCAACTGACTTGTTGACTTCAACCGCTGGTTCTACGCTGGATTTCACACTTTGTTCAAATGAATTGTACATTCCAACACCCTTTTTAACACTAGAAACTACTGTTATATTGTCAGGCCTGGCATCAACTCTTGGTGGATGGCATTCATCTTTATGGCCTTGTCTCCAGTGAGATATCTGGCACTTGAAGGTACAGTATTTGACCCCTTTGCAGCGCTTGCATCTAAACGTGGTTGGCCTTCGGCACACCACGCACACCCCTTTCACCGCCGCCGCCGCCGCCGCTGCCTCCGCCTGACGGGCCGCCGGCATTTCCAACTCCACCGCCGCGGCCTCCTCCTCCTCCTCCTCCTCTTCGTCCTCCCGCGGCGAAGCCACCTCGGGCACCGTCCACAGCGGCGCACCCGCCACGCCGCCCCTCCCCCGCGCGTAGCAGTACGCCTCGCGCTCCGCGACCTCGGCCTCCACCGCCGCGAGCCTGGCGAGGCGCCGCACCTCCTCCCTCCGCGCCGCGGCGCGCCGCAGCGCCCCACGCGCCACCGCCACCACCGCGGCGACCGCCACGGCCACCACCGCCACCGCGAGCGACAACGCCGCCGACGCCATCTCCCTCCTCTACCGCTCAGTCGACTCCCCTTCCCCCGCCTCCGGCCCAGCGCATAGATCTCACCCCCGCCGCCGAAGCCGTCGCCGCTCGCATGCACCGGGTTCCCCCCCAACAAGCCACCGCCCCCACACAGCCCGGAGATTTAGGGTTCGCTCCACCCCCGCTCCGCTCCACCACCACCCCCCCTCCCTTTTGTCGTCCACCGCGAGTGGTAACGCCAGCAGCGGAACACTCCGGAAGGCAGCAGCCGCGGAGGAGGCCGCGCCAAGGAGTGACGCGAGGGCGAGCCCGCGAGGCGGTGGGGGGTGGAAAACGTGAGAGGAGAGGGAGAGAGCAGCCGCCCCCGAATGCGCGGTAGTAACGGCTGTTTCTTTCTTCTTCCTCTTCTTTTTTTTCCCTCTCTCTCCCGGCGGCGCGTCACCGCGCGCGAGACTAGTCACACAGGCAAGGCACGCGGCGGCGGCGGCGGCGGGCGGCCGATGTGGGGGGAGGAACAGCGGGAAACTGTAGATAGGTGGCGGTGGCTGGCGCGACCGGCGGGGTCGCGCGGTGTCTGAGAAGAACTGCGTGGTCGTCGTCGTCGTCGTTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0441800.1 | 9 | 17600754 | T | C |
| Osa09LNT0441800.1 | 9 | 17602729 | A | C |
| Osa09LNT0441800.1 | 9 | 17602852 | C | T |
| Osa09LNT0441800.1 | 9 | 17603145 | A | G |
| Osa09LNT0441800.1 | 9 | 17604124 | T | A |
| Osa09LNT0441800.1 | 9 | 17604489 | A | G |
| Osa09LNT0441800.1 | 9 | 17606737 | T | G |
| Osa09LNT0441800.1 | 9 | 17606910 | A | C |
| Osa09LNT0441800.1 | 9 | 17608078 | G | T |
| Osa09LNT0441800.1 | 9 | 17604963 | T | A |
| Osa09LNT0441800.1 | 9 | 17607040 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0441800.1 | osa-miR5541 | Cleavage | 4.5 | 20.955 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR5814 | Cleavage | 4.0 | 16.216 | 1 | 24 |
| Osa09LNT0441800.1 | osa-miR160c-3p | Cleavage | 4.5 | 14.901 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR164a | Cleavage | 5.0 | 14.032 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR164b | Cleavage | 5.0 | 14.032 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR395f | Cleavage | 4.0 | 17.448 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR399d | Translation | 4.5 | 18.46 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR399j | Translation | 4.5 | 18.46 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR160f-3p | Cleavage | 5.0 | 14.901 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR164f | Cleavage | 5.0 | 14.032 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR435 | Translation | 4.5 | 19.692 | 1 | 20 |
| Osa09LNT0441800.1 | osa-miR437 | Cleavage | 3.5 | 19.87 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR1857-3p | Translation | 5.0 | 23.403 | 1 | 21 |
| Osa09LNT0441800.1 | osa-miR2092-3p | Translation | 4.5 | 19.75 | 1 | 22 |
| Osa09LNT0441800.1 | osa-miR5495 | Cleavage | 5.0 | 16.463 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0441800.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0441800.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0441800.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)