© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0442900.1
GTGGGGCTATCTGAGTATATGATAGTGAGCCAGGATTGATGTTAAATAATCGAGGACCGACTGCCAGTAACAAGCAATTATCTGATTATCCATGCTAATGGAGTAATTAACATGTTACAACTTACAACAGCCTACAGAAATTAGAAGAAAAATATGATGTCAAAAGACAACCTAAAGAAAATATGATTATATTTGATGGTATACTTGACAAAATGGCCGATGAAAAATGCTTGGTGCAGCTCTCATTTTTAGGGGCCTCTCCAAGAGGGATAAACTACAACATTTTTATCAGTGTGTCAGACTAAGGTTTTGTTACAACATGTATCAGAAAGAATTCACGTCAGAGGCTCATAAGCAGCAGGTCTTGCTACAAGGAACAGCACTCTCAACTCTTGCTCTTGTAAAAACCTCTCATTATTGTCTCCAAAATCTTAGGAAAAAACTATTGCTGCTGTGCGGTTCGATCTTTTCGTCACCATCAATGAAATTGGTACAGAATTTGTGCTGCTGATGCTCTGAACACCGCTATTGCCAGCAGCAGGTGGAGCTGGGAGAATTGCATGAGACCAGTCCATCAATGGATGTGAACTGATGCCTCAGCCCTCAGGAGAGAGTCACAAGACACTCAATATGTATATACAGATCCTTTGGGAAGAACTGGTCAAACCACAAACTGTTTAGGCACAATACTGGTAAATATATGTGGTCTTCTGTTACCGTCATAAGAAGATGCCAACCTCCTTGCCCAGAGGCTATCCTCGGGTGACCAGGATATTGTGGAACCCATTGTTGCACACCACCTCAAGTTCAGTAAGGCTGTCGCAAGATGTTCAGTTGCTTCAAATGTCTTCATGATCTTTAATTCAGCATCTGGCTCTTCGCTGAGGATTAGATCTTCTACAATTACTCCTTTTTCCTTAAGAACATCGGCCTCCTCAGATATCATTCTCACACTGAGGACTTGCAATGCTTCAATTGCAGTATTGTACAGTTCCTGATCCACGTAGGCACAAAATGTGTACCAAAGCGTTGATTGATCAGGTCGGATTTTAGCTCGGTGAATACACTCAACTATATATTCAACGACATGAATCTGACCCTTTTCAAATGCCTCTAAGAGTACTGTATTGAAAATCTCAATGTCAGGCTGAATTCCTTCTATTATGCATGCATCCAACAGATCCAGCGCCCCCTCAAAATCCTCTCTTGCCAATACAACCTTCACAAGAGATGTGAAAGTCAAAATTGTAGGATAAAAGCCATCTCGGAGCATCAATGATAGCACAGCGCTAGCTGATTTGACACAAGGCAACAATTTACAGCACTCTATCATAATATTATAAATTGCAACATTTGCTGGAAGTCCGTATGATCTGATGGTCATGAAGGTTTTTATTGCTTTGTGGGTATCCTTGGCCTTGACCAGAGCATGCAAGGCAATGCAATAGAGGTCACTTTTCTGATAAGGATCCATGTTCCATAAGACATTTTCAGCTACATTCAAGTACTTCAGCATTTCCTCTGTCATTCCCTCAGCCCCAAAAGCTCGTATCAGGTTTTTCATGCACACAAAACTGTGTTGGATTTCATTGTTTAACATGTCTGTCTCGATTATGCTGATCCTTTTAGAAACATCAGCATGCGAGAGCACATTTCCTTCTTCATAGGGAACATTGACGTTGCCAAACAGAGAAAAGAGAAGCTCATAAGTCCTGAGATTCGGTTTCAAATTCAGATGCCTCATTTCAGCTAGTACGCGGACAGCTCTTTCTGGTTCATTCATCATGTCGCAACCTGCAAGCAAAGCATTAAAAGCGTGTATGTACTTCGGTTGTGGCTTTGAAATTCTTGCCAAAAAGTCCTCAGCCAGATTCAACTGTAAACTTCTGCTACTGCCAACTGAGAGAGCAGCAAGTGTGTCATTGTAAGGTTCAATACCCCTTCTCTCCATTGCTTCAATCACTTTGATGGCATATGCAACTCCTTTCCCAACCATGACAGCCTTGATAAAACCATCATATGTAAACTTTGATGGTTGCAATCCAATCCTTTGCATCTCTAGTAATAACTGCTCAGCTATCTGGCAGTTGTTCAGTTGCACACACGCATGTACAATATCATTGAAAGACCAAAGCAGAAATTTCTTTACTGTAGCTGGTACCAATCTTAATGGCCTTGCCATCCTCCCATTGTCTAGGACAGACTTGTCAGAGAGATTGTCGCCAGTAGAAATGAATTCAGCATAACCCTTCAATTGCAAATTTTCAAATGAAATATTTTCTTCCTGTGACAGCTCAGGTTGAGTATCAGTTGAACATTTCTCAGATTCCTCCACCTTTCCTTGAAATGATGATGGCAGGTCACAGCCTAATAGAATTTTGAGGTCTTCTAATTCAGTCAAAGCAGGCACAGGAATGTCTAGTCTTGATCTTTGGTATCTTCCTTTACCCCTCAGATGGTCAGTGTTTCGTCCAGCAAGGACTACCATATGTTGCATGATACGATATGCAGATCGAAGGTCCCCTAGTGTAGTTAGGGCCCTAACAAATTTCCTCTGTAAAATGATGCTTGGGTTATAATTCCTAGTGCAGTCCTTCCATATATCATGAACTGCAGATAAATTTCTCTGAGAAACTTCAGGAGCTCACAATATGTTATTTCAGACTTCCCAAGAAAATAAGTTTCCATTTTCTCTAGACAGCCTTCAATATCACTCTGCTTTGTGGTACTCCCGCAGCCACTTAAAAATATGTTAAAAATTGGCAAATAATTGTGACTGCTTTCTTTCTCAACTAAAAGAGTCAGCCAGTGAATTGCCTCCTTTGAATACCCGCCTTTGCTGAGAGCTCGAGTGACAGATCTGTAGACTCTTTGACTCATATGTACAGCATTCTCTTCCATGAGTTCCAAAGCCTCCGTAACAAACAAAGGATCAGGTGCTGTTGCACAATATTCCAGTATATGAGAAAAATCTTCTGAAGTCAATGCCCTGTTAGTCTGTTGAAGATTTGAAAGCAACAAGGATGCTTGCTGCCGATCACCTCTGCGAAGAGCACCAACAATATCTGCTTGAATGGATCTAGTAGCCAAACTGGTCATCCATTTAAATTCATCATATTCGTTTGAACAAGTTGAGGCCTCTCCGGAGTGAACTCCACTAACCACATTGGCTTGCGCAATCTGCGGGGGCTTGAATGCCGCGGAGGAATTGGTGCACCGGCGAGCGGCTCTCGATAGTATTCGATGCATCGAGGGAGATGTCGTCCGTAGAGCTCCTGGGCGGGGTCCCTTCGCGGCGGGCGAGGCGCGTCGCGCGAGCAGCCGGGCAGCGGGGCTGGCTGGCTGGCTGGCCGCCGGCGACGTTGAGGCGCCGAAGGCCGTCGACGCGAGGGGGGCGACAGGTGAGGGGGCACCCCGACGAACCCGCGCACGGGGAGGCGGCGGCGGCGGCGGCGGCGTGGCTGGTGATGTCGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0442900.1 | 9 | 18108489 | C | T |
| Osa09LNT0442900.1 | 9 | 18100894 | C | T |
| Osa09LNT0442900.1 | 9 | 18102887 | C | A |
| Osa09LNT0442900.1 | 9 | 18104541 | C | A |
| Osa09LNT0442900.1 | 9 | 18105021 | T | C |
| Osa09LNT0442900.1 | 9 | 18105545 | A | G |
| Osa09LNT0442900.1 | 9 | 18105865 | G | C |
| Osa09LNT0442900.1 | 9 | 18107770 | A | G |
| Osa09LNT0442900.1 | 9 | 18109632 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0442900.1 | osa-miR5527 | Translation | 5.0 | 19.515 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR5816 | Translation | 4.0 | 10.07 | 1 | 24 |
| Osa09LNT0442900.1 | osa-miR167c-3p | Cleavage | 5.0 | 15.092 | 1 | 23 |
| Osa09LNT0442900.1 | osa-miR396a-5p | Cleavage | 5.0 | 17.771 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR396b-5p | Cleavage | 5.0 | 17.771 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR396c-5p | Cleavage | 5.0 | 17.771 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR398b | Cleavage | 4.5 | 14.002 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR812a | Cleavage | 4.5 | 20.048 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR812b | Cleavage | 4.5 | 20.048 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR812c | Cleavage | 4.5 | 20.048 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR812d | Cleavage | 4.5 | 20.048 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR812e | Cleavage | 4.5 | 20.048 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR1850.3 | Translation | 5.0 | 13.078 | 1 | 22 |
| Osa09LNT0442900.1 | osa-miR1851 | Cleavage | 4.0 | 11.747 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR1870-5p | Cleavage | 4.0 | 11.6 | 1 | 24 |
| Osa09LNT0442900.1 | osa-miR1870-5p | Translation | 5.0 | 16.781 | 1 | 24 |
| Osa09LNT0442900.1 | osa-miR1875 | Translation | 5.0 | 12.316 | 1 | 24 |
| Osa09LNT0442900.1 | osa-miR2879 | Cleavage | 5.0 | 20.048 | 1 | 24 |
| Osa09LNT0442900.1 | osa-miR395x | Cleavage | 4.5 | 8.934 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR5071 | Cleavage | 4.0 | 15.353 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR5071 | Cleavage | 5.0 | 16.261 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR5486 | Cleavage | 5.0 | 13.93 | 1 | 21 |
| Osa09LNT0442900.1 | osa-miR5518 | Cleavage | 5.0 | 12.828 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0442900.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0442900.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0442900.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)