© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0450700.1
CAAGTCGGTCTGAATGATACAATCACATGCATGTTTAGTTTACAATCTAGTGCTACTAAGATTACATTACACGTAGAAAACCTGCCCAACATTGAGCATGCTCTCATGAGGCACATTGAAGATGGCACTGTTCTCCCTGCAGATCTTCCTCAGGAAAGCATACATGTAGTTGATGACAATCTTCTTGACGAACCCTGAATCCCTGCGAGCTCTGATCACCGTGTTCCCGAGGATGTGCACCACCCCGGCGTCCCTGCACGCGTTCAGGAACGCGATCTCGTCGCCGACGCTCTGGAACGCCATCTGCCCCGACGCCGGCATCACCTGGCTGCTGCCCGTGTCGTCGGACCTGGAGTTCACCGGCACAATGGAGTCATGGGTCGACGTGCAGCTCATCACCTCCATGACATTGTTGGTGCCGGTGGTGGTCACGCCGCCATTGCTGATCCCTGGGTTATTTGGGAGGCTCATCATCAGGGTGCTGTACTCGTCGGAGTCGCTGTACTCCTCCATCATGCTCTCCAGCCTCACGAACAGAATCAGGCTATCGAACAACATCTTCTCGAAGTCGTCATCCTTCTTGTGGATGTCCTTGTACCCGTACCGCGCCACGCACCGGAACATGTGGAAGTTCTTGGGGCCGATCCGCTTCACCAGGAACCTCTCATCCGGTGGCACGGTGTACACCGGGAGGTACTTGACGCAGACGAACACCAGCGTCGAGTGGATCGCCGGGAGGTTGGTGATGAAGTGCGAGAAGATGTGAGGAACACCGCTGGCGAGCTCGGTGTAGACCAGGCCAATGCCGGGGACCCTGACAAGGCCAAGGCTCGGACCAAGCCCCAGGATCCAGGCCATGGACACCTTGCTGTGCATCTCAAACTCGTACCGCTTCAGGGTGCCGTAGTGCCAGACATACATGATGATCATGAAGCCTGCCGCGAAAACCAGCGGAACCCATCCTCCCTGATCGATCTTGCGCACGACGGCCGAGAAGTAGGGGATCTCCACAAGCAATGACAGCACGGTGAAGGCGACGACCAGGGTCCAATGGCTTCGCCACACCAGCAGCATGATGGGGATCATCAGAAATGTTGTCACAAGCATAACCATGATCACAGCAGTACCATATGCATTTGCAATCTGGGATTGGTTTTTGAACCCTGCAGTGACAGCTATGCAGAAAACCATGAGGATCCAGTTAATATCAGGGCTGTATATCTGGCCGAGATACTTCTTGGAAGTATGGATGATCTTCACTCGGGGAAAGCACCCTAGGGCAAGTGCTTGCTTGATAATCGAATATGTTGCAGATATAGTGGCCTGACTAGCAACTATTGCAGCTGCTGTTGCAACGGCAAATGCTGGCCAAAGTATAGGAGCTGGAAGGGAGATATAGAAGGCATGGCTGACTTGGTTTGTGTTTGCAGCTATAAACGCAGCCTGACCAGTATATTGCAGAAGAAGGCATGGGAACACAACCACAGTGAAAGCAATCTGAATAGCTTGTACAGGAAAATACGAAAGGTCAGCAAACAATGCTTCTGTGCCTGTTATGCTGAGCATAATTCCACCTAAAGAAGTCCAACTAGTCTTCCCTCGTTTAAAGTAACGATATACATAGACAGGATTGAAAGCCTTAAGAACTGAATGGTCATATTTGCAAATGTTTACAGCACCAAGAATCCCAATGAGTATGAACCAAACAAATACTATTGGTGCAAAGAGCCAGCTGACTTTATCAGTACCATAGTGCTGCATGCTGAACAGTCCAATCAATATCAGCACGGAGATAATTACAACCACATCTGATGAGGAAAACAAATTCAATTGTTCAGTTATCCACACATCGATCTAATTCTCCGCATTACTTGTTTGCAGGATCTGATTATAACACATAGAAACTATTTGCGCATACAGTATGACTTCAGGGCTCCTGGAACAAAAGGCAATGCTTCGATACGCGGTTATCATGTCAATCCTATCATTCGCATACACAGGACAGTATGAAAAATTACTAGAGGTTGCTATTTGCCAAATTTTCGTTCTATTGAAATATAAAAGCAACGGTCAATTTGACATACTGTAAAGACTGAGCTGCATGAGCAGCTGAATTTGAAAGAAAACACAGCAAATGTGAATACTGAGAAAACAGAAAATAACAGAGTAGTAACTTCAACATTTGATATGTACCATTTCTCATTCTGCCTTCTTCAACTTGTATTCCACCAGTCGCAGAAAGAACTGATATGGCAGGAGTGAGTATTCCATCTCCAACAGCCATACAAGTTCCAAATAGTACAAGAATAAGAATTAAATTCTTTCTGAATTGGTGCCCCTCTAACCATCTTTGGATTTTGGCAGCAAGAGACTTTTCTTCATATGTGCGGCGACTGTATGTTGTTAGATCTTGATCGGTTCTATGTTGATTTGGAATAATATTTATCTTTGCATGACGGCAAAGCAGTGAATAAAGGGCAAATGTTCCTCCTTGGCCATTGTCATTTGCTCTCAAGACAATGAAAACATATTTAACAAGTGGAATGAGTGTAAGGGAGTAAATTATAAGAGAGAGTGCTCCAATAACTTGTTCTGTATCTTCTATTCCATGAGGAAAGATATTGTAGAAAACATATAGAGGTGATGTGCCTAAGTCTCCAAATACCACACCAAGGCTTTGGAAAGCTAGCCGTAGCAGTAAAATTGTTGGATAGGTCTTTTCTCTGTACATATTCCTGAGTCTTCCAGCCTCTGCATCCATGGGTTGATCAAGATTCCTTTCCAGCTCCCACATTGCCCCCTTACGGGAATACTCATTTGTTCTGGTCTCCATGGGTTCAGACTTCAGATCAATCAACAGTAGTTTTTTACAAGCTTGCAACTCTCCGCATGCGAAGAGGCGAGAAATTCTCTGGGGTTCGAAGCTTCACGGGCTCACACAAAACAGGCCGGCGAGATCAAAACTTCTCCCCAGAACAGCAATCCTCCGAAACCATCGGCAAAAGGGGGATTTTTTACCACAATTTCCTACTCACCACTTTGTAGATTCGCCGGACAGGTCCGTCCTTGGGGATCATCAAGAACACATCACCCATACGCTGGCTTGTGGATATGAGGAAGAGATGGTGAGATGTTAGGAATTCGCGTGGGAGCATTATTCCGGACAGGGATGTGTGCTCGGGGGAGAAAAGATTGGATTTTTTCTCTCCGGAGAATTTCTTCACGGTTTTCTTCTGGGTGGAGTGGGGAGAAATTGCTAGATTTGGCACCATTTGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0450700.1 | 9 | 22368418 | G | T |
| Osa09LNT0450700.1 | 9 | 22368816 | A | G |
| Osa09LNT0450700.1 | 9 | 22369521 | T | G |
| Osa09LNT0450700.1 | 9 | 22370320 | A | G |
| Osa09LNT0450700.1 | 9 | 22370442 | A | G |
| Osa09LNT0450700.1 | 9 | 22370519 | T | C |
| Osa09LNT0450700.1 | 9 | 22370742 | C | T |
| Osa09LNT0450700.1 | 9 | 22371427 | A | G |
| Osa09LNT0450700.1 | 9 | 22371611 | C | T |
| Osa09LNT0450700.1 | 9 | 22372899 | T | G |
| Osa09LNT0450700.1 | 9 | 22373030 | C | T |
| Osa09LNT0450700.1 | 9 | 22373214 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0450700.1 | osa-miR5542 | Cleavage | 4.5 | 12.716 | 1 | 21 |
| Osa09LNT0450700.1 | osa-miR6256 | Translation | 3.5 | 11.849 | 1 | 22 |
| Osa09LNT0450700.1 | osa-miR1860-5p | Translation | 4.5 | 20.248 | 1 | 21 |
| Osa09LNT0450700.1 | osa-miR1873 | Translation | 5.0 | 16.125 | 1 | 24 |
| Osa09LNT0450700.1 | osa-miR2098-3p | Cleavage | 4.0 | 12.952 | 1 | 20 |
| Osa09LNT0450700.1 | osa-miR2878-5p | Translation | 4.5 | 16.876 | 1 | 24 |
| Osa09LNT0450700.1 | osa-miR2863c | Translation | 5.0 | 13.169 | 1 | 24 |
| Osa09LNT0450700.1 | osa-miR5521 | Cleavage | 4.5 | 20.223 | 1 | 21 |
| Osa09LNT0450700.1 | osa-miR5521 | Cleavage | 4.5 | 16.016 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0450700.1 | 9 | nan | Morphological trait | Root | RM215 | RM205 |
| Osa09LNT0450700.1 | 9 | Spk(t) | Morphological trait | Culm/leaf | nan | nan |
| Osa09LNT0450700.1 | 9 | nan | Morphological trait | Root | RG667 | RZ404 |
| Osa09LNT0450700.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Osa09LNT0450700.1 | 9 | qTN-9-2 | Morphological trait | Culm/leaf | RM215 | RZ404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)