© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0057200.1
GACAAAAGGTGGCATTAGCAGTGCTAAGCATCACTGAACACTGATTAACTGTAATCCTAACAAAGATACAGTGACTGTAAGGTATGGGGGACAAAAATTCAAACATGAATCGTGTCCCGATGTACATTTTCTTTACAGAATTCACAGAGTGGATCCAATCATCCAAACAAGAAGCCAACTATTAACACAACCTATTGAACTAACATAAGCATGGAAGCTGCTACTTTCAACCTTTCTTCGTGTCATCCTCGGAAAAAAAAAACTTTCTGCATGCAAAATATTGGCACATCATTCAAGCGAACATTTCTCTAGCTCTTGAGGTTGCAGATCTCTGTTCCTTGTGGAGACGCCCAGTCTCATGCCGACGGAGACGAGAGTTTCCAGTGATCTGGCACTATTGGCCAGAAGATCAGCGTCAAATTCTATTGCATCCTTCTCAAAGACGCATATTACTGTGCTCCCTCCAAAAGCGAAATATCCAAACTCATCTCCTTTGTGGACGTAGTCACCCTCTTCTTTCAAGAACTCGATGCTTCCAACCATTGTTGCTCCAATGGCCACGAATGCCACCTTTCCAAACTCTGAAGTTGAGATTATTGAAACAACTCGTTTGTTCTCGGTGAAAACATTACAATATTTGCTGTTCACAGCAATAGGATTGACCGTGTACAAGCATCCAGGAATTTCCACAAATTTCTCCAAAGTTCCTGAGACGGGAACATGAAACCTATGGTAATCCTGAGGCGCAAGCCGAAAGATTACCAATGATCCGTTGCACAAAGCATCAGAGTGTACATCCTTCCCAAGGAGACCCTCGATAGAAAATTTGCGACCCTTAATCCATAATCTTGTGCTTTCATCAACAGAACTGAAAGTCATTAAACGACTATCAGCAGCACAGGTAGCAATTGTGTCTTGCTCATAGCATGCAATTGGTCTGGCCCCAGGCTTCAGTTGTCTTACGAAGAATTCATTAAATGTCTTGAAACTTTCAAGAGGATCCTTGACTTCATCCAAATTAATTTGATCCTTAAACAACTCAAGGAACTTTGGAATATCTTTGGCAGATTCAGGTGAGCTCATCTTTTTTCCTTGCTTCTCAGATAGGTTCTTCAAGAGATCTTTGACACCTGTGTCAATAAGAGTTAGCCCTACTTTTGATTGGTATAAAGCTCTCATAGACAACACAATCTTTCCGTCTATAACTTCTTCAACTAGTCTCTTAGTTCGCCGGTCGAAAACCAAGATATGAGAAGCAGTAGAGCCCGAGTGCAAACCAACATCATACGAGGAAAAATGAGCCCATTCGCTAAGCTTAAACATCCACCCATATGATGCTTGCTTATCTGTTAGAAATCCTCCAGTCATAATCTGATTACCAGTTCCCTCATCAAAACAAAGTGTCATGTGTATCATATCATTTATTTTGTCGTGTTTACCAAGAATTTCACCACAGACAGGACAGTTACTGATAAGTGGTTCTTTCTCTTGTTGATTAGCTAGAAGGGCTGCCAGTTCATCCATGTCAACTATACCATCACCATTTTTATCAGCTTGACGGAAAAGCTCTTCAATCTTTGCAACTGCTAATTTATTACCAAAAGCTTTCATCAGGTCTGAGAATTCAGATAATGATAGCTCTCCATCTTCATTGTAATCCACTATAGCCAAGACACGGCGTGCAAAACTTTGTTCTGTTTCAACGGGATCTTCAATGTAACATGAGATGGATATGCTGCCCACAATAGTAGCTGATGATGATGGGTCCAATAGAGAAAGGACCTCAGAGTGTTCATCCAGATCCTTAGTGAGCAATTCAAACAGATCAACTTCACAGTAACCAACCAAAGTATTCTTGGAGAATCGGTTAGTCTCAAAGACAGATATGCGTGCAATGTGAGGTCCATTTGTTTCTACCACAACCTTCTTTTCAGAGTTCCATACGGGCGTGGAAGTATTGTCAGACTTCTCGGTGCGGTACGTGCGCTCGCCCAGCGAGAGGCACGCGATGAACTTGTCCTTGAACTGCATATCCGCCTTCACTATCCGGATGCGCGCGATGCCGGCGAACTCGTCGACGGCGATGGCCCTCCCCGTCCCCGACTCGGAGGCGTGGGCGTCGCCACCGGGACGCCCCGCGCGGTCGCGGTGGCGCAGGCGGAGGCGGCGGCGGAACCGCTCGAAGCGAGACGGCAGCGGCGAGGGCGGCGACTCGCCGTCGCCGCCGCCGCCGCCGCATGCATTGTGGCGCGAGGGCGAATGGCCCATCTGTCAGTGAGATGGAGTAGTTGGACTCGACGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0057200.1 | 1 | 42303993 | A | T |
| Osa01LNT0057200.1 | 1 | 42304272 | A | G |
| Osa01LNT0057200.1 | 1 | 42304489 | A | C |
| Osa01LNT0057200.1 | 1 | 42304551 | A | T |
| Osa01LNT0057200.1 | 1 | 42305532 | C | T |
| Osa01LNT0057200.1 | 1 | 42306507 | C | T |
| Osa01LNT0057200.1 | 1 | 42307565 | A | G |
| Osa01LNT0057200.1 | 1 | 42308587 | T | G |
| Osa01LNT0057200.1 | 1 | 42309031 | T | C |
| Osa01LNT0057200.1 | 1 | 42309035 | T | C |
| Osa01LNT0057200.1 | 1 | 42309123 | A | G |
| Osa01LNT0057200.1 | 1 | 42309180 | G | T |
| Osa01LNT0057200.1 | 1 | 42309777 | T | C |
| Osa01LNT0057200.1 | 1 | 42310396 | G | T |
| Osa01LNT0057200.1 | 1 | 42311110 | A | G |
| Osa01LNT0057200.1 | 1 | 42306831 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0057200.1 | osa-miR156a | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156b-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156c-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156d | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156e | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156f-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156g-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156h-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156i | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR156j-5p | Cleavage | 4.5 | 13.326 | 1 | 20 |
| Osa01LNT0057200.1 | osa-miR1866-5p | Cleavage | 4.0 | 17.584 | 1 | 24 |
| Osa01LNT0057200.1 | osa-miR2055 | Cleavage | 3.5 | 17.973 | 1 | 21 |
| Osa01LNT0057200.1 | osa-miR5071 | Cleavage | 4.0 | 12.568 | 1 | 21 |
| Osa01LNT0057200.1 | osa-miR5340 | Cleavage | 4.5 | 15.128 | 1 | 23 |
| Osa01LNT0057200.1 | osa-miR5494 | Translation | 4.5 | 13.407 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ801 | RG323 |
| Osa01LNT0057200.1 | 1 | nan | Morphological trait | Root | RM1387 | RM1067 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ801 | RG323 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | ph1 | Morphological trait | Dwarf | RG236 | C547 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Morphological trait | Seed | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | tn1-4 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | fll1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | ph1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ801 | RG323 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other disease resistance | RG109 | RG236 |
| Osa01LNT0057200.1 | 1 | sd1 | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Morphological trait | Root | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | PLFDH | Morphological trait | Panicle/flower | RG323 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Other soil stress tolerance | RZ801 | RG323 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057200.1 | 1 | ph1.2 | Resistance or Tolerance | Drought tolerance | RM104 | RZ801 |
| Osa01LNT0057200.1 | 1 | Fh1-2 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | PNF(DH)1 | Morphological trait | Culm/leaf | RG323 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ730 | RG810 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG810 | RZ730 |
| Osa01LNT0057200.1 | 1 | qNOP-1 | Morphological trait | Culm/leaf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | qPHT-1 | Morphological trait | Dwarf | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | qPL-1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RZ14 | R117 |
| Osa01LNT0057200.1 | 1 | qPH1-1 | Morphological trait | Shoot/Seedling | C86 | RG236 |
| Osa01LNT0057200.1 | 1 | pl1.1 | Morphological trait | Panicle/flower | RZ730 | RZ801 |
| Osa01LNT0057200.1 | 1 | qPHT1-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0057200.1 | 1 | sd-1 | Morphological trait | Dwarf | RZ730 | RG810 |
| Osa01LNT0057200.1 | 1 | qRIE 1 | Resistance or Tolerance | Submergency tolerance | C86 | G54 |
| Osa01LNT0057200.1 | 1 | nan | Morphological trait | Culm/leaf | RZ801 | RZ14 |
| Osa01LNT0057200.1 | 1 | rrw1b | Resistance or Tolerance | Other soil stress tolerance | C86 | RG236 |
| Osa01LNT0057200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0057200.1 | 1 | qRNd1 | Resistance or Tolerance | Other soil stress tolerance | RG236 | C86 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)