>Osa10LNT0058700.1

ATACAAATAAGTACTGATGATTCAGAGAATGATATCGTAAAACACATTGGATTTCCGGTGTACAAAACTGGGGGCCACACTGACGGCGTAATAAAATGTTACATGTCTATTTACATTGACGTGTAGGAGTATGCTCTTCGATCCATCATTTGCACTGTATTGAACCATGTTTTGTTCTCACTCTCCAGATCTTACACATGGGACAAATCTTCATGCACTTCGTGAAGAAACAGACATATATAATACACGCGCGAGTATAGTCTCCGCCGCAACCCAAGAGAAAAGCATTCAACCGTGATGGGGAAAAAAATGTCGCCACAATTTTAGCAAAATCATAAATTTCTTGTGATGTAATATCTCCATCCTGGAATTTTCTCTTACACATATATGCACCATCGTCAAAGAGGATTGCCAGAAACCCACCTTGCAAGCATAGCAAGGCATTGCTTTGGCATGTATTCTGGAGCAGTATGTCCACCACCCTTGACAGTTGCGAATGTGAGGTTATTGGAGTATGACCTTATATATCCTGCAACTTGTCCATCCACAAACCATGGTCTCCACTCATCCACGACAGAGAAATTCAGAGATCTAATCCAGGCTTGCGTGCCGATGAAAGGGATAATCATGTCATGATCACCACTGTAAATTAGGCTTCTGTAGCCTCTAGTTGTCAAATCCAGATGGTATCTTACTGAACTTTTGATGTCATAAGTGTACAGAATGTCGTAGTTGCATCTTTGCCACGAAGGAACTGTTCCCTGGTGAATTCCAAGGGCCTCTCTTACTGTATCATTGTTGGCCCATATTCTGGACATTGTATATTCTGCCGTTCTGCATTCTGAAGAAATCTCAGACAAGTGAAAGTCTTGGAGTTGGAGTATCTGCCGTACCCCTGAAGTGAATGGCTTATCGATGCGCGGATTATGCGGGCTTGCAAAAGTGCAGTAAGGCTCCAGAATGTGATTTCCGTATATGTCCTTGACACACTCATCTATGGCATCAAGAGTATTTGTGCACTGAACGCTTTGCTGCTGGGTGTTGTGCTTGACACTGCAGCTCTTCTTGTATGCCTGATACAGTTGGTCAGATATGAGACCCATCCCATGGGCAAATGGAATTTTGGATGGAGCATCGAAGTTGTGATCAGTGACTGGATTGCCCAAAAGGTAGCCCTTGAGATTGAGAGATGGTTTGGGTGATGAAGTGGCGATTCCGAAGGTGACAGCCGGCACAATCATCCCAGAGTAGGAGTCGCCGGCGATGTATAGAGGATTGGAGAGGAAATCGGGGTGCACCTCCTGAAACCAGTTGTTGAGGAAGACGAGAATGTGGTGGACAGCAATGGTATCGCCGGTGCGGAATCCGGCGTCGGTGTCAGCGTAGGAAAAGCCAGTTCCGACAGGGGAGTCGAGGAAGATGACGTTGGTACGTTTGGTCCACGACTCCGGCTTGTACAAGAGCCTTGGCAGTTGTCCATGTCCATGGCCATGGACATCGAAGGTGAGGGGTCCGACCTCGTAGACGAGGCCGGAGAAGGCCGAGCAGCCTGGCCCGCCGGTGAGCCAGAGCAAGAGGGGATCGTCGGCCGGGCTGCTCTCCGAGCGGATGAAGTAGTAGAAGAGGCGCACGCCGGCGATGCGGTCCACCTCCACGTACCCGGTCTCCAGCTCGAAGGGGAGCGCCCCATCGAACCCCGGGAGATGCCTCACCACTCTCCTGCTGCTGCTGCTGCTGCTATTGCTTCTCTCTCTCGCAGACAGGCAGCTGCAGGTGACCAGGAGAAGAAGAAGCAGCAGCAGCCGCCGCCGTGTTACCGCCGCCTCCGTACATAGATGCATCGAGAAGTAGATAGCTTCACCTATTTCTTGTCCTTGTCCTTCATCCCTCACGTTTT

Explanation	CPC Score
noncoding (weak)	-0.167054

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0058700.1	10	101143	T	C
Osa10LNT0058700.1	10	100492	T	C
Osa10LNT0058700.1	10	100965	A	G
Osa10LNT0058700.1	10	100982	A	T
Osa10LNT0058700.1	10	101080	G	A
Osa10LNT0058700.1	10	101090	T	C
Osa10LNT0058700.1	10	101169	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0058700.1	osa-miR5832	Translation	4.5	22.607	1	21
Osa10LNT0058700.1	osa-miR6248	Cleavage	4.5	19.745	1	21
Osa10LNT0058700.1	osa-miR167c-3p	Translation	4.0	23.928	1	23
Osa10LNT0058700.1	osa-miR167c-3p	Cleavage	5.0	22.554	1	23
Osa10LNT0058700.1	osa-miR397a	Cleavage	4.5	18.761	1	21
Osa10LNT0058700.1	osa-miR397b	Cleavage	5.0	18.761	1	21
Osa10LNT0058700.1	osa-miR169f.2	Cleavage	4.0	16.729	1	21
Osa10LNT0058700.1	osa-miR2090	Cleavage	5.0	14.485	1	22
Osa10LNT0058700.1	osa-miR5485	Cleavage	4.5	21.137	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus