© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0063700.3
AAAAACGTCACAGCCACGCCATTCTTATATTCTTATTTTCAATGTGATCTTGGCACCATGTTACAAGATGGAAGACAAATTCATCTGCAAAAGCAGCTGAAGATCTATATCCTGATATGCGTTTGTGCAATCTGATGCACACAAGTGTCTATGTATGATATATAAATTTCCTGTAAACAAAGAAACTCTTTACATATTTTATCAAGCTGAACTATTTTCTGGGTGGTTTCTAAGATTTTTCTCTTGCCCTTGCTTGATGGTACGCAAAAATTGATCCACGAGAAAGGAAGGTCAATCATGGATTACTCAAGAGAAAGGTTTCTGATGTTGCGCTGCTGATCTGCAATTCCTTTGGCTAATCGTGACGGCAGAGGAAGCAAGTCAGCTGGTGTTCCAGTGGAGGATGTGCTCGTCAATTTCGGATTGAACCACCTTCTTAGAGTAAGCCCGTTGATCCTCATTTTTCCATGAGACTCCTCGCCATGATATTTGATTCCTAATCTCCTCAGCAGGGAACCAACTGCTTGACCGACTCTTCCAGCAAGTTTAAGTGTCTTCTCCCTTTCATCAAGGCCGACTTGTTTCTTTTCTGTGGGTAATAATATTGTCACGTTGGGTAACCTTGCGCCTGCAGCTAGTCGATGCTTTAAAGACCTCAATGTTGTAAGAACTGAAACCTCCGCAGTGTAGATCTTTGACTTTCGGGCATCAACAAGAATACGGGTATCTTTCATGGAAATACTTTCAACTGCTCCTAACGAAGCAGCTTCCTCCAGTATTGAAAAGGCACGAATGTCGTATTCACCAAAACCTTCCAACAGTGAATTCACATTGGGATGATGTGGAATATCACAACTTATTCCCATATTTTCAATGAAAGTATTTGTTAATGTATTATCATGAGGAAACCTTAAACATCCCAACACTTGAGACAAAACATCACTTGAGGGTAATAGTCCTGTGGAAATTGCCTCACGGTAGACCTTAATTGCTGAGGAGGTCCATTTGTTCTCAATCTGTGGTTTCCCTAAGTTGAATGTGACAACGATATTGCCCAGTGAAAGATCATTGTCGAACATTTGTAGACACAAGCCAGTAAGACAACCAACGATTGTGGGATTGAGGTCAATACTGTCTATTTTTAATTGTTCAAATAGATCCAAACCCAGTTGTGCTTCAGCATTCCTTTCACAAGCCACAAATAACACCGAATAGGTTATCATATTTGGACAGACTCCTAATCTCTTCATCTCACTAAGGACCTCAAAAGACTTCAAAACTTGATCACCATCACACAATGCGGTGATCAGAGCATTCATCATTGAAACGGTTGGCATTAATTTGATTGACTTGATCTCCTCAAATAGCTGCAATGCCTTTTTCCAGTCCTTGGCATTGCAGCAAGCACCCATTAATGAACTGTATGCAATGGTTCCAACTTGATATCCCTTTGCTCTTGCATCTTTCATTATCTCAAAGGCAGCATCAGCCCTCCTAGCATGGCCAGCAACATCAACTAGAGCACTCAGAAACATCTCATCAGGTTGTACTCCAATCTTGTTCATATCTTCATAGATCTTCAGAGCAAATCCTAAATCACCAGTCAAGCTACAGCTTCTCAATGCTATTGTGTAAACTTCTGGAGTACCCTTTATATTGTACTCCTGAAGCATTTTGTATACCTCACGAGCTCGATCAGCCTGGCCAGCCTGAATACATGTCTTCATCAGAGCTCCAACTGTGACATGATCAGGAAGAATCGGTTTGGATCCTTTAGATTCAGAGGCTTCTGCTGTCATTTCTGATAGAACATCAAAAGCTCGAGCAACCGCTCCAGATTCACCGCATGCACTGATCAAAGCATTAAAGACAACTCGATCTGGCTTCACCTTCTACTTTGAACTCATGATACCATAAGCACCAAATGCTTTTGCTACTTGACCAGCTTTTGCACAGCCATCAATCAGTGCACTATATGTGTTAACATTTGGCTCTATTCCAGCACTGACCATCTCATGGAAGACCTCAAACATAGCATCAACTTTTCCACACTTGGCACAAGTCGATATAAGTGTTGTGTAAAGTTTACAATCAGGTTTTAGCCCAGCTTCCTTTAGGAGCACCATAACTTGGAGAGCCCCATCAAAATCTTGCGAATTAGCGCACACAGATAAAAGCATATTGAAGGTACTCATTTTTGGGTTATTGATCAACTTGCAAAAACGAACAGCTTCCGGAACAGCCCTTTGCTTCTTACAGGCATTCAGAAAGCTAGCATGGTGGATCTTATTCATATCAAGCAATCCCTTTTGCTCCATGCTTTCCAATAGATCCACAGAGTCTTTCAATCTTCCATCAATTAACAAACTATTGTATCTCCTCAAGTAATCTGGCACGTCCTTTGTTCCCCTCAATCCAGCTCTATTTGCTGAAGTAGAGTTTTCTGGATTCTCCTTGCTCAGTAAATTAGAAATACTCCAGCCAATTAACTTTGCATCATCATGGTCATTCATTGCTTTCTTTTGTTTACTCACAGGACCATCCCTTAAGCATGCAACTGGAACCAATCGCCCTGAATATAGAGCATGCTTCTGCTCTCAAATATGAGCCCCCTGCATAAGAATTTGTGAACTCGGATGCTTTTCTTGGTTCAAACAGATTGCTGGCATGGGCTTCAGGAATAAAATTCAGTGGATGCTCGTTGATTCTTTTGAAGGATGAAAGAGACGTAAAATCAACATAGTCTCCTTGATCACTTTGATGGCATCCAAGTAAATTGGCACCCTCACTATCTGTTTTATTATCAGGAGGACCTTGGCCATTTTTAGTCTGCTCGTTCTGTTTTGAAAGTGATAAAAACTGATGAGGCAGTCCACCTAGCTGAGCCCTTCTGTTAGCAAAATGTCTGCTTTGATGTTGTCCATCAGACACAGAACGCGATTGTGGGAGAATATCTTGGACCTTTTCTATGGAACTTGTGTTTGCTGGTCCATAAACACCTTCAAATGTGTCTAACGACCTGTAAGTACTAATTACAGAACCAACCTGTGTTGTATTATTTACAGTATCTACACCAGAAAAAACATCAGTTTGGCAATCCGTTCTATCCACAGTCATTCTTCCAGAAACAGATGGCTCTGAAAAGACATTTTCATGAGTTCTTCGAGATGAATAGCTACTGTCATCTAACAAGTCTGTCGATGTGCCAAGGGCCTTATTATTTACGATTCTTTTGTCATGTTCATGTGAAACCTGCATGATTGCGATATCTCCACAAGTTAGAAAGAAATTGATTTTTTTGTATTAAATCATGTTCCCTTTTTTTTTTTTGCTAAAAGTGCATCGTCAGCTGCCATTTTCCATGCCCAACTGAAAAATAAGACACTTTTTCATCTTGCAAGAAATGAGAAAGACTGTGCTTGATATTGGATATGACAAGCGATTATGATAAAAGTATAAATAAGGCAATGATGATTTTTGAACCTTAACAAGTATTGTCTCACAATGGACACCAGTTTAGTTGATTTTCCCAAATTTGTCAATTTAGTAGCTACCAACTGACCGCGTAAACTCACACAGATTTAGCTCATCTGTAGACAAAACCAGAATAAGGTTTTTCTATCCTGATTTATTTCTTGCATTAGACAAATATGTGGAAACTAGTAGGCATGACTTGTACTGGCCGTTTACAGTTCTGTCCATTCATAATTTACATTCCTTGATTAATACAGTTTTCTTTTATCACATTTACAGAGGTAGTAGATGATTTCTTGGAAGAATGGAGAATTCCGTTTCAGTGAGATTAAAACAGAATTCTTCAACTATGACCTGTAGGGCCGCATTCCATTTGACCCAAAAAGAAAAATGATCCGTTTTATTTTTCAAATCCGTAATCACTCAGAAAGCATATGCTGACCTCCTCCTCCTCGGGAGAATCCCCGCCGCGCCACCGTAGCCAGACAAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0063700.3 | 10 | 5578916 | G | T |
| Osa10LNT0063700.3 | 10 | 5577587 | A | T |
| Osa10LNT0063700.3 | 10 | 5577600 | G | T |
| Osa10LNT0063700.3 | 10 | 5577626 | C | T |
| Osa10LNT0063700.3 | 10 | 5578226 | C | T |
| Osa10LNT0063700.3 | 10 | 5578462 | A | C |
| Osa10LNT0063700.3 | 10 | 5580943 | A | G |
| Osa10LNT0063700.3 | 10 | 5581028 | T | C |
| Osa10LNT0063700.3 | 10 | 5581233 | A | G |
| Osa10LNT0063700.3 | 10 | 5581260 | G | C |
| Osa10LNT0063700.3 | 10 | 5581306 | G | A |
| Osa10LNT0063700.3 | 10 | 5581426 | T | C |
| Osa10LNT0063700.3 | 10 | 5581516 | A | T |
| Osa10LNT0063700.3 | 10 | 5582162 | A | G |
| Osa10LNT0063700.3 | 10 | 5583137 | C | T |
| Osa10LNT0063700.3 | 10 | 5583349 | C | T |
| Osa10LNT0063700.3 | 10 | 5583363 | T | C |
| Osa10LNT0063700.3 | 10 | 5583537 | A | G |
| Osa10LNT0063700.3 | 10 | 5583662 | A | C |
| Osa10LNT0063700.3 | 10 | 5584875 | T | C |
| Osa10LNT0063700.3 | 10 | 5584932 | A | G |
| Osa10LNT0063700.3 | 10 | 5585502 | A | G |
| Osa10LNT0063700.3 | 10 | 5586259 | C | A |
| Osa10LNT0063700.3 | 10 | 5578644 | G | A |
| Osa10LNT0063700.3 | 10 | 5578653 | A | G |
| Osa10LNT0063700.3 | 10 | 5578732 | C | T |
| Osa10LNT0063700.3 | 10 | 5579016 | A | G |
| Osa10LNT0063700.3 | 10 | 5579161 | A | G |
| Osa10LNT0063700.3 | 10 | 5579535 | C | T |
| Osa10LNT0063700.3 | 10 | 5579609 | A | G |
| Osa10LNT0063700.3 | 10 | 5579686 | A | G |
| Osa10LNT0063700.3 | 10 | 5585674 | G | A |
| Osa10LNT0063700.3 | 10 | 5577815 | T | C |
| Osa10LNT0063700.3 | 10 | 5582841 | G | A |
| Osa10LNT0063700.3 | 10 | 5578586 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0063700.3 | osa-miR5828 | Translation | 5.0 | 11.703 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR815a | Cleavage | 4.0 | 18.614 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR815b | Cleavage | 4.0 | 18.614 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR815c | Cleavage | 4.0 | 18.614 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR1428a-3p | Cleavage | 5.0 | 12.347 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR2055 | Cleavage | 4.5 | 12.429 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR2870 | Cleavage | 5.0 | 14.797 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR1439 | Cleavage | 3.5 | 17.17 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR5522 | Translation | 4.0 | 19.93 | 1 | 21 |
| Osa10LNT0063700.3 | osa-miR5814 | Translation | 5.0 | 13.967 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0063700.3 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0063700.3 | 10 | nan | Resistance or Tolerance | Other stress resistance | R1933 | R1629 |
| Osa10LNT0063700.3 | 10 | qRRE-10 | Resistance or Tolerance | Other soil stress tolerance | R2174 | R2194 |
| Osa10LNT0063700.3 | 10 | qPBN-10 | Morphological trait | Panicle/flower | RM216 | RM311 |
| Osa10LNT0063700.3 | 10 | nan | Physiological trait | Sterility | R2309 | RG257 |
| Osa10LNT0063700.3 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)