© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa10LNT0069300.2
GGTACGAAAAATGTCACCATGTTAAAGACTTCACATTTTTATCCTTAGATTCTGCAATTTTAGGTTTGTGCTAGGCATGGCAACAAAGCAATGCGCCATTTTAAGTGGATCACCGAGTCATACTGAGAAAAATCTAGGCAAACCACATGATGATTACTGACTTAAAATTCCTCTCTAACTAAGCAATTGGATCATCCTTATCGCCTATCAGATAACACGCCTAGGCAAATTCATCTTAGCGGGTACGTTGTCTGAAGGTGCTGCATCAGGAACTGAGCAGAGTGTACATGACGAAGTGATGAGGGCATCTCGATGTTTGACATGTCTATGTCCGGTACTTCCTCTGCTATCTCCTCTGTCGTGAAAGGAATGCTCAAGTCGTCATCCAAGAGAAATGAATTTGACACTGGATTTTGTGCATCGCTGCTCACCATGTCCCTCATTTTGGCAACAACCTCGGCTGATACACTGTGGGTACCATATTTGTCATCCCAGTACATCGTACATAGACGATATATCTGCCTCACACTTAACGCCGGACAAATATTTTTCTTAATCTGCTCAAGAGTCCTTTTGCTTTTCTGTGCAATAATCAGAAATTCAACCGCCTCTCTGATGTACTTTAGCTCATCCCAAGCTGCACCTCTTCTGTAGCATCCAGAATCCATTTCTCCAGTACACAGAGCCCAGTTTTCACATATTCTCCATTTGAAAATGTGCAACACTCCCGTCGTAGGAGCAAGCTATTGAACAATTGTACATTTATGAAGGAGAAAACTTGAGTTACTAGCTTGCGAATGAAAAAAGAAGGCACAAAGTTTTTATGCAGCCTGTCCATCAATGAGTCCAAAAATTTTATAATCCGATCCCAGTGAGCACTTATTGGTTGCTGCAAGGTCACATCAGGCGATCTCGACCTCCTTCCACTGCCTCCTCGAGCAAGTTTTGGTGCTTGAATGCAGAGGCTCAAAAGAGGTGATATCTCTTTCTTAAGATTGTCACGGATTAAGCCAAATATCTTCTCCAAGGAAGCAGTTAGTTGTTGCTTAAACAACATAGCTGGGTATTTAGCATCTATATGCGACATGCTATTCCGTTGTCCAAAAGCTTTCAAAGGTGGTCTGAGAGCATCATTTGCCTTTTCACATAAGTGAGGATCTGAAGAAGATCTAGAAGGCGCCGCGATGAATCCTTTTGACCGTAAGTTTCTTTGCAACAGACATAAAAGGGCAGATGCATTGGCTAGCCAGTAAGGCAGAATATCATTCTCATTTTCTGTCTTCAGAACTGTATTGATGTTCTGAATTATGAAGTCGAAAATAGTTGTTCTTTCAGCCTCGAATACTCCCCAATGGAGAAGACATTTGTAAATGACACATGCAGCGACTGGTTTTCCCTTCTTGAATCCCATATCATCCTTGATGCACCGCTGTAGAAGTTCATGGTACTCCTCATGTCTTTCTGAGTTCATTCTTGATCTTCTTAACTCTGTCGGGTTGTGCGGGAGAGGCACGATCTTTACAGGTGAAGATTCAATCAATGACTTTGGGCTGCATGGGGAAGACCCAATAGGATGGCTCATGGTGCGGCTATGCCTAGGAGATAAGCTTAAGGCCTTCTGCCTCAATAAATGGTTCTCATCTTCTAAATTTGAGATCTTATCCTCCAAGTTTTTCAAGTTGTCCCGAAGATGCAGATAATTTCTTTCCACGCCATGAAGCTTGTCCATATTATCATGGCTGCATTTTTGGGCTTTCAAGAGCTCTTGTTCCATTTCTGCATTCTTCCCCTTTAGTAAAGTATTTTCCCTCTTTAGTTCTTCTATCTGAGCAAGATTGCTGTGAAGAAGTTCTTGATCCTTGATTGATAACCCTAACTGTTGTTGCATTGATGCAACTTCCTTGCAACCATTAATTTTTTCTTCATTGGCTGCCTCCAACTCACATTTTAATGATTCCACGATTTTGAGAAGCTTAGAGACTTCTAGTGCCTTCGACTCTTCTGCAGCTACCCTCTGCCTCCTTTCTAGGGTGAATCGCAAAGTAAGATCTTCCAAGCTCCTCTCAAGTTTCCCTTTTGCTTCACGCAAAGCTCCAGTCTCATATGCAGCTTGTTTAAGGTTCCGAAATGCCCTTTTAGCAAGCTTCTGTCTCCAACAACACTGGATCAGAATTGTTGCATGTCGGTATTGCCGATGGAAATCATAGAGCTTCTTCATTCTCCACAAGGCCTGGATAATGGTAGCAGCTTTATTATTCTTCAATTGCAGCAATTTCTGGATTGCTAGCATATAGCGAACACCAGACTGGATAACAAGAGCTGAAGAACGGAGATGCAAATATTCACACCGACAGAACCATCTCCGAGCATACTTTTCTACTGAAACAGCTGCTGCTATCTGTCTCTTAGCATCAAGCAAATTTCGTGCCAAACACCCTCGGCAATATGCTTGGAGAGAAACAGAAGCTTTCTTAGTAGAATGAAACTCCTTGCAAGCAACAAAGGTTCGAAAGCGACCCTGAACTATCCTGGCAGCCTTTTCCAGAATCTCGGTACGTTTGGAGTCCAAAACAGCAATCTGGCCAGCCCTGAGAAAAACTTTTGTTCTGCCAAGTTGAAAGTTCTCAAGATGTAATTGCCTTAGTATTTTTTCTGTCAGCGATTTCTCATCAAACCTTTCATCCATATGTTCTGGAACAAGAAGTCCAAAGCGATCAATGAATTCGGTATATGTCCTCCTTGTTGGATAACCAGCAAGACTTATTCTAATAGCCTCAAGCACACCCCCACTACGTAGTTGCTGTAGTACACTTCCATTCTCGAATTTCTGAGGATAGTTCAGAGAATTTGGTTTTACACAACGAATGTAGTGAGGTTCTGTTGAGCTGAGTGTTTCCATAAGCGCTTGGAGTTGTTGCTTAAACCGAGAAGCTATAGAAGAAAACTTATAAGATGATTTTGATGGGTCATCTTGTTGCAAAGCAAAGAGCCTAGAAAGGAATGAGCATTTGGAAGAACAAAGAAGATTCTGATGCTCCAAATTTACATAATCTCGGTTCTTCTCCAAAAATAACTCAGTTTGGTATATCACCTTTCCAGCAAAATGCGAGAGGGCAAAATCTGTCTTTGAGAGCTTTGGCTTTTCCAGACGCGGATGAGCTTTAAAATTCTGAAATAGCTTCATTGCAAAGGTCTCATGTGTTGATTTTCCAAGCATGCATGCTTCATCCAGAAGTGAAACAATCCCAATTGGTTTCTTTTCAATGAGATCCAATATGTCTTGATTATCAACGAATTCAATGTAGCTCCAATTGATTTCTTCTGTTTTGTATTCCTCTTGCTCCATCTTGAAAACATGCTTATTAAAGTGCTGTTGAAGTTTTTCATTCGCAAAGTTGATGCACAGCTGCTCAAAACTATTATATTTAAAACACTCAAAACCATAGATATCTAATACCCCAATTAGTGCCCTCGACTCCATGTCTTGTCCAATGGACATATTAATATTGTCAACAAGCCAATCAAACAATTGAGCATATACAGTCTTTGCCAAAGCATCACGACTAATTGCAGCAGCAGAACTGTCAACTGCCTTGACGATGTTTCCTTCAGGAGTTTTAATTGTGCGATAGCACAGAGTTGAAAGCAAAAGGCTTCCATCAACCATGAGCAAATCAGCAGCCATTTGGAGATGGAATTTAGACTTTTCATCCTTGATAGCAGATGAATCAAACTCTTTCCCAGGAGAAAATTCAATATTTCCTAGATGAAGGATAGCAGCAACAGTTCGGAATATGGCTTCCTGGTGAGAAAAACTTATACCAACAATATCCATTGCTCTCCGTGTTTTCAAATATTCCTCTGCTTCGTTGACACCTTCTAACTCATATGTATGGCTTTGATTTAGGTAGTTAAAGTTCCTAGGGTGAGCAAGTTTGTATTTATCTGCATCCTGCCCAGATGCACAAAGTTGATAAAAACAGTGGTAATTCCTTTCAGACTCAGATATCTGTACAACACGAGACCTTTCCAGAAGATAAGTTCGAACTGCAGCTCCCGATATTCTACCTGATTTGTCAAATTGAATCTCAACAAATTTCCCAAAGCGACTGGAGTTATCATTCCTCACCGTCCGTGCATTACCAAATGCCTCCAACAGTGGATTTGATTCTAGAACTTGTTGCTCCACAGATCTTATATCACCTGTTGAACGGCCCCCAACAAAAGTAAGATATCGCATAATAAGCTTTGTGGTCTCTGTTTTTCCAGCACCACTTTCTCCACTGACTAATATGGACTGGCTGCGGTCCTCACTAACCATAGCTCTGTATGATGCATCTGTAACAGCGAAAACATGTGGACTCAATTCACCAAACTGCACGCCTCTGTACTGCTCCATCATGTGCATATCATAAAGATGAGGTAGCTTCGCAAAGGGGTTTACTGCGATTAAAATACGCCCCGTGTATGTATAGATTTCATTGAACCCATACCGCCGAGCGAGATTGCAGAGCACCCCAGGCTCGTGGAGGTAGACCAGCTTGGTCATGTCGTCGACGCCCCCGAGGTCGGCCTCCGTGTCCCTCGGCAGGACTTTCTTCCCATCGACCACAGCCTTGGCGCCGCCGGCGAGGGTGACAGTAACGGAGGACGGCGAGGAGGAGGCGGGGGATGTGACCACGGCCTCGGCCCACGCATGGTCCGGGTGCTCCACCCACACAGCGGTGCCGGGGCGGAAGAGCATCGCGGCGGGCCGCGGCGGCGGCGAGGAGGAGGAGGAGGAGGAGCCACGACGTGGTGGTGGTGGTGGCGCGAATGGGTGGTAGAATGGAGATGCTCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa10LNT0069300.2 | 10 | 13235133 | G | A |
| Osa10LNT0069300.2 | 10 | 13252935 | A | G |
| Osa10LNT0069300.2 | 10 | 13252933 | C | T |
| Osa10LNT0069300.2 | 10 | 13252474 | T | C |
| Osa10LNT0069300.2 | 10 | 13231817 | C | A |
| Osa10LNT0069300.2 | 10 | 13232115 | T | A |
| Osa10LNT0069300.2 | 10 | 13232703 | A | G |
| Osa10LNT0069300.2 | 10 | 13233004 | T | C |
| Osa10LNT0069300.2 | 10 | 13234088 | C | A |
| Osa10LNT0069300.2 | 10 | 13235174 | A | T |
| Osa10LNT0069300.2 | 10 | 13235325 | A | T |
| Osa10LNT0069300.2 | 10 | 13236570 | C | G |
| Osa10LNT0069300.2 | 10 | 13237241 | T | C |
| Osa10LNT0069300.2 | 10 | 13237307 | T | C |
| Osa10LNT0069300.2 | 10 | 13237856 | G | A |
| Osa10LNT0069300.2 | 10 | 13238241 | T | G |
| Osa10LNT0069300.2 | 10 | 13240768 | A | G |
| Osa10LNT0069300.2 | 10 | 13240834 | A | C |
| Osa10LNT0069300.2 | 10 | 13241107 | A | C |
| Osa10LNT0069300.2 | 10 | 13241182 | C | G |
| Osa10LNT0069300.2 | 10 | 13241760 | C | T |
| Osa10LNT0069300.2 | 10 | 13243357 | T | C |
| Osa10LNT0069300.2 | 10 | 13243460 | G | A |
| Osa10LNT0069300.2 | 10 | 13243923 | G | A |
| Osa10LNT0069300.2 | 10 | 13245561 | G | C |
| Osa10LNT0069300.2 | 10 | 13245713 | A | G |
| Osa10LNT0069300.2 | 10 | 13245796 | A | G |
| Osa10LNT0069300.2 | 10 | 13246040 | A | G |
| Osa10LNT0069300.2 | 10 | 13246968 | T | A |
| Osa10LNT0069300.2 | 10 | 13247137 | T | C |
| Osa10LNT0069300.2 | 10 | 13248568 | A | G |
| Osa10LNT0069300.2 | 10 | 13249687 | G | A |
| Osa10LNT0069300.2 | 10 | 13249701 | G | A |
| Osa10LNT0069300.2 | 10 | 13250573 | T | C |
| Osa10LNT0069300.2 | 10 | 13251079 | G | A |
| Osa10LNT0069300.2 | 10 | 13251104 | A | G |
| Osa10LNT0069300.2 | 10 | 13251200 | T | A |
| Osa10LNT0069300.2 | 10 | 13251218 | A | G |
| Osa10LNT0069300.2 | 10 | 13251778 | A | G |
| Osa10LNT0069300.2 | 10 | 13252104 | G | A |
| Osa10LNT0069300.2 | 10 | 13235111 | A | G |
| Osa10LNT0069300.2 | 10 | 13238194 | C | G |
| Osa10LNT0069300.2 | 10 | 13237518 | A | G |
| Osa10LNT0069300.2 | 10 | 13237784 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa10LNT0069300.2 | osa-miR6248 | Translation | 4.5 | 14.126 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR6248 | Translation | 5.0 | 8.757 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR6252 | Cleavage | 3.5 | 17.972 | 1 | 23 |
| Osa10LNT0069300.2 | osa-miR167a-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167b | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167c-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR395u | Cleavage | 5.0 | 19.688 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR398a | Cleavage | 5.0 | 23.588 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167d-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167e-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167f | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167g | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167h-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167i-5p | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR172a | Translation | 5.0 | 16.081 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR172b | Translation | 4.0 | 16.081 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR172d-3p | Translation | 5.0 | 16.081 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR167j | Translation | 3.5 | 19.738 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR1423-5p | Cleavage | 5.0 | 15.826 | 1 | 24 |
| Osa10LNT0069300.2 | osa-miR1861c | Cleavage | 5.0 | 19.495 | 1 | 22 |
| Osa10LNT0069300.2 | osa-miR1865-3p | Translation | 4.5 | 18.552 | 1 | 24 |
| Osa10LNT0069300.2 | osa-miR1862e | Translation | 5.0 | 14.64 | 1 | 24 |
| Osa10LNT0069300.2 | osa-miR2096-3p | Translation | 5.0 | 20.635 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR2878-5p | Translation | 4.5 | 21.321 | 1 | 24 |
| Osa10LNT0069300.2 | osa-miR2921 | Cleavage | 5.0 | 12.024 | 1 | 24 |
| Osa10LNT0069300.2 | osa-miR2922 | Translation | 4.5 | 16.291 | 1 | 20 |
| Osa10LNT0069300.2 | osa-miR5071 | Cleavage | 4.5 | 21.699 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR5073 | Translation | 4.5 | 15.557 | 1 | 23 |
| Osa10LNT0069300.2 | osa-miR5073 | Cleavage | 5.0 | 15.429 | 1 | 23 |
| Osa10LNT0069300.2 | osa-miR5340 | Cleavage | 5.0 | 13.828 | 1 | 23 |
| Osa10LNT0069300.2 | osa-miR5499 | Translation | 3.0 | 18.758 | 1 | 21 |
| Osa10LNT0069300.2 | osa-miR169p | Translation | 5.0 | 18.402 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa10LNT0069300.2 | 10 | Phyllochron | Morphological trait | Culm/leaf | R1629 | R2447 |
| Osa10LNT0069300.2 | 10 | ssd10 | Morphological trait | Panicle/flower | RG257 | RZ583 |
| Osa10LNT0069300.2 | 10 | nan | Physiological trait | Sterility | C701 | C16 |
| Osa10LNT0069300.2 | 10 | nan | Resistance or Tolerance | Other soil stress tolerance | R1629 | R2447 |
| Osa10LNT0069300.2 | 10 | qSPB2-1 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Osa10LNT0069300.2 | 10 | qSPBp10-2 | Morphological trait | Panicle/flower | C1633 | RM239 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)