>Osa10LNT0073700.2

AAGGCTTTTCAAGAGCAGATCACTCTTTGCCATTATCAAGCAAAAACTATACATTGCTTCGCTGGATCAGCAGTTACTAGAGCCAATCCACACCAGTGCTCAGAAGATTTTGCTTCAGTGCTATGCTACCTGAAACATGCATTCTGGCAATTGGATTATGGAGTTATGGACCATAGATATAGGATTATGGAGTTATGGCCCATAGATATATGATCAACAACAGTTTGGGAATTGAACTTCATCCCTAAAACTTCAGAGCGATAACTGCTAATCTAAGGCCTAGAAGGCCTGTATAGCCGCTACTGTAAACAAGCACCCATGGAAGGAAAAAAAAAACATTTCTACCACTGAACCTACAGAATGTACAAGGAACATCTCTTCCTCTTCCTAGGAAGGAAGCTAACGAACCAGCTTGTCGGTGACGCCAGATTTTATTGTCCTTGGGGTTCAGAAATGCGGAGGTTGTTTGTCAGGGCTCTGCTGAATCCCAATCCTCAAACTCAAAGTCAAATAGAAGATCTAGAGAATCCGATCCTTGCGTGTCTCTCTGATGAGCAGCTTCCATTAGTAATCCGTCCGCAGTGGAACTTACTGAATTATTAAGATGGGATTCATTGGGAACAAGGCTAGGCTGGTGATTGAGGTGAGGCAAAATTTGTGTTGTTTGTGCAAGACAATTGCTGCCTATCATGCCATTGGCCACATTCTGCCCATTACAAGGCATCAAGTTCGCCAATGCCACAACAGGCTCACTGTGAAGACCTACCCCCTGGAATGTAATGGAATCAAGAGGTTGAGAAATAGTCCTGTCTGGCTGCTGAGACTCTGCAGCGCCCATATTGTAATCTGGTACCTCCAGATCAGATGCCAGACTATCAATTATGTCTTGCCAGCTTTTGCTGTAAACATCCAATGCTGGTTCAGGCAGTAATTGTGTTCTCTGAGCCGTAAGAGAAATGCACCGAGAAAATTGTGGTCCTGTACCGTGTGTTCCGTTTGAGGCAGCCTGATAGGACGACGCCGACTGATCTTGTTGCCCTTGAAGCGCTATTGGGGCACTTAGCGATCTCTGAGGGGGATTTTTCTGAACAGTACCAAACAATGTTCTTGGTGCAACTTGAGCTGGCTGGGATGCATGTGGCGAGGATGGCTGGTGCAACTGGGTATTGTTCGGAGCAGCAGAACCAAACTGGTTATCATTTAGAGTTACTATGCCTGGAGAAGTAGCCCCTACTCGTTTGAATCTTGTGCGTGATTGAGGAATCTGAATGCTGGGAGCATTGCTCATACCTCTTCCAGCCCTTGTTGCAGGAGTTGTTCTTGTTGCACTGACAGTTCTCCCTACACTCGGTGAGACTCTTACTGATGTATGTCTTGTTTGAGTTAACCCCTGGTTCACAACATTCGCAAGATGACTTTGGTTGGGAAAGTAAGTAGTCATATGCGATTGTATGAGTGAAATTTCGCACTGTGTATCTTGCTGTACAAATGACGTTGTTGTTGGGTATACGACATTCTGGCGCTTTTCTGGATGAGATGTTGGCAGACCTTTGCTCTTGAATGTATGTCTCATTGCTTTCCACTTTTTTTCCTTATCTGTAGCATGACAATGATCATAAATCTCGGTGCCCTTACCCCAATAATTGCATGGGGCTGGAGTGTCACATACAAAACAGTGGCACATGCTACAATACTTCACATGAGAAGTGGTGCTGAAGGGCAAGTTAGAACATAAATGGCGGGAATGAGGGAAGTCCCTGCATGCTACCGGGCCTTTCTCTGCGACGATCTGCAATTCATCCGAGCTGCCATCTCCCTCACTCCCTTTCTCCCCCGCGACAGCGACAACATCATCAGGATCCCCATCCAGCACCACGCAATCATCGTCGTCTTCCTCGCCGCCGCAATCGGGCTTGCCCCCCTTCTGCTGCGCCATCACCGGCGGCGCCGACAGCTCACTCATCACCTCCAGATCATCGAACTCATCCGACAAAGCCCTCTCATCCTCCTCTCTAAGAAGGTCCGCAATCCACCCGAGGGAGTCGACGGACGCCTTCTTGGTCGTCGTCGCCACCGCCACCGCCGCCGCGGCGAAGCCCTCCTCGTCGGAGCTGATGTCCACCACATCCATCGCTGACCCCATCCGCTCGGATTCCGATCGGATTAGCAAGAACCGGATCCGAGAAACCCTCCCCGGCCCAGGATGTCGCCGGCCGCCACGGATCCAGGACGAGAGGCGGCTCCCAAGAAACTCCACCAAGAACACGCCTTGCCCATCAAACGCGCAGCGCGATCTTGCGCTCCACCAGCCGCCGCCGGAAAAGATCGAATTCTGGCGCGATTTGGGGGGTGAGGAAAGCGAAGCAGCTGCCTCAAGAAGAAGCCCTCTTCTCCGCCATGGCCTTTTCTTCTTCTTGCTCTCGCGTCAGGAGCAGAAAGCAGGGGGAGAAGCTAACTGCTCCT

Explanation	CPC Score
noncoding (weak)	-0.897056

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0073700.2	10	17192671	G	A
Osa10LNT0073700.2	10	17193330	A	G
Osa10LNT0073700.2	10	17193494	A	G
Osa10LNT0073700.2	10	17193795	A	T
Osa10LNT0073700.2	10	17195101	T	C
Osa10LNT0073700.2	10	17195407	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0073700.2	osa-miR6247	Translation	5.0	23.668	1	21
Osa10LNT0073700.2	osa-miR7692-5p	Cleavage	5.0	19.53	1	24
Osa10LNT0073700.2	osa-miR169a	Translation	5.0	18.869	1	21
Osa10LNT0073700.2	osa-miR172b	Cleavage	4.0	12.889	1	21
Osa10LNT0073700.2	osa-miR2100-3p	Translation	5.0	13.429	1	22
Osa10LNT0073700.2	osa-miR2866	Translation	5.0	19.15	1	20
Osa10LNT0073700.2	osa-miR5488	Translation	5.0	24.534	1	21
Osa10LNT0073700.2	osa-miR5488	Translation	4.5	16.842	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0073700.2	10	ssd10	Morphological trait	Panicle/flower	RG257	RZ583
Osa10LNT0073700.2	10	nan	Physiological trait	Sterility	C701	C16
Osa10LNT0073700.2	10	nan	Resistance or Tolerance	Drought tolerance	RZ892	BCD386
Osa10LNT0073700.2	10	qLSVB10-1	Morphological trait	Panicle/flower	RM258	C677
Osa10LNT0073700.2	10	qLVB10-1	Morphological trait	Panicle/flower	C677	RM258

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus