>Osa10LNT0079300.1

CAAAAAACAAAACAAAACAAAACAAAACAAAATCAGATTCAGGAGGATCACACAGTTGCCGAAGTCGCGCCAAATTCTCCAGGATCACTTCCTTCCCCTTATCGACTTGCCCTTGATCGCCCTCATTTAGCAACTCTTTCCATCTTTGCATCAGAGCAACGACCTTTTACACCACCAGTTAAACACGTTTCAGCATTTCTCTCCGTACGCATAAGAACTCTTCAAGCTTCTGTGCCTCATCAGGCGTTTCTTTGACCGCCATAATGTTTCTTTCAACCTCCTCGCCCTATCTCTCTTGCCCTTTGCAGTAATTCCCAGTGCAATGGCCCTGTAGTCATGTTAAATGCACCGGGGTAGCATATCAAATGAGCACCTGAATCAAATGCGTAGGTGTCGACTCCAAATACAGAACTAATGCAGGCAAGCGGTTAGCGAGGAGGAGGGAAGAAAGCCGGCTGCAGGGGAGGGAGGAGAGCCGGCCAGGGGAGGGCAGAGAGCTGGCCAGCGAGGAGGGCAGCGATGTGACCGGGGGAGGGTAGACAGGCGGCCGCCGGGAGGGGAGGAGGGGGGCGGCGGCGACGAGGGCCGGGGGAGGGCAGCGAGGGGAGAGCAGCAATGAGACCGGGGAAAGCGGAGAGGCGGCCGACGGGGAGGGCAACGACATGGCCGGCGGCGAGAGTTTGATTCTCACGGTGGAGGGGCGGCGCGCCGGCGGCACCGGGTCGCAGGGGATGAGGGGAAGGTGGAGATGGAGGATACGCGACGCGCAGCGCAGATGACGG

Explanation	CPC Score
noncoding	-1.17001

Transcript ID	Chromosome	Locus	Ref	Alt
Osa10LNT0079300.1	10	22009327	T	C
Osa10LNT0079300.1	10	22007081	C	T
Osa10LNT0079300.1	10	22008471	G	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa10LNT0079300.1	osa-miR394	Translation	5.0	18.265	1	20
Osa10LNT0079300.1	osa-miR390-5p	Cleavage	5.0	6.841	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa10LNT0079300.1	10	nan	Morphological trait	Seed	RZ811	RG561
Osa10LNT0079300.1	10	qRf-10	Physiological trait	Sterility	RZ811	RG561
Osa10LNT0079300.1	10	Rf1	Physiological trait	Sterility	nan	nan
Osa10LNT0079300.1	10	nan	Morphological trait	Panicle/flower	RM171	RM333
Osa10LNT0079300.1	10	Qbph10	Resistance or Tolerance	Insect resistance	RM484	RM496
Osa10LNT0079300.1	10	nan	Physiological trait	Sterility	RZ811	RG561

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus