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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs
Sequence

>Osa10LNT0081100.1

GAATCGATACACATTTTCAGCTTGCATATTCTATGGACAGGTATGTTACAGTGTAAAAAAAAACAAAACAACAATATGCTTTACATTCTCAAGAAACTAGCATGAACTCGACCTCTATGTAATGGAAAACTGTACAGGCTATGTACTGGCACTGCAACGCAGGCCTCCTGCCCCAAGTTGCGAGTAATGTATGGGTGAAACTGTATTTTGCTGTTGTAGCAAGTCCCCTTTGTGGCGCTCTGGCCTGTGTGCGAAATTGCTAGGCCAACCAAGCCAAAGAATAAAACTTGAAATGATCACACCGCTAATGATCTGAGCTTAACGTGGTTCATTTCGCACGCTATGAATGCTGATAAGAATGCCGCCCACTGGGATTTGCAGGAGCCGATGGTAGCGCTGGAGCTGTAGAAGGTAGCCGGACCAAGGCAGGCTGAGGTGGTGGTGCAGTAAGGGCGTAGGTCAGTCTTGACGATGAGCTCTCAATGAGCCCTGCAACTCCAGCAGCAGAAGACTGTGCATTGGATGGGAGGAATAAATCGTGCTTCTGGTCCTTGTAAGCACTCCATACATCAGAAGAATTCAGAATTTCACGAACTTTAGCACAGTGTGCGCCTTCCGTTGCAAAAGCATGAAGCACCTCCACTGCCAAAACACGCCCAATTGAAGCCTCTGATTCATTCCACTTCATTTGGTTACACAGTCCCTGCCTGCCACCAGCTCGCCAATCAAGAATACCAAGCAGTACTTCAACAAGGCCAACCTTTAGCCCCTGTGCAACAAGTGCATCTCTAGCCCGATTGCCAGCACCAACAACACGCTTTAGTGTCTCTAGTGCCAGTATACTTCCACCTTGCCATCCAATTGCTTTCATAAGCAATGGAACAACCTGAGGAGTTCCTGCACTTGTGGCTGCCATAGCTTCTGCACAAGTAGTGCTGGAAGCCAGCTGATGCAGCACTCGCAAACAACTAAGCCGGACACGTTCTTGTGGAGTCTGCACGGTAGAGTCCGCCGAGTTCTCTTGATTGCTAGGTTCCGCTTGCAACCTACTTGTGGTTTGTCCGGATGCCATAGTGTCCCGTCTACCCTCATATGCCATAGCTGAAACCAGCTTTGGAACATAACCTAGGTAACCAACATGGTCTGCAAGGGCTGGATGAACACGCAACAATGAAACCAATGCAGCAGAAAGCAGCAACGGAAGCTCTGGATCAACAGCATTCGCCTCATAGTGTGTGGCAGCAACTGATGAGACATACTGATCTAGCAGCCCTTCTAGGAACCTTTTAGGGTTTCTCAATGGAAACTTGGGATCCTTTAGGAAGAGTCTCACATAAATACCTCCAACCTGTGGCTCATCCTTCATTACATGCTGGCCAGATGCTTGTTCAGGCACATCCCAATCAACAACACGCCCTTTCATCTGCTCTTGGTAGAGGTCTGTGGCCATGGTTGACAACTGCGCAGAAAGAGAAGCTGCCATTGCGGGTGTCCATACAAGTTCAGGGGTTTCTGTGGTCTGTTCAAGACATGAAACAACAGCTTCACCAGGCCCATCTCTAATTGCAGAAACCAAACCATCAGGTAAGAATCTAGCAAGTGTGATTGCCACCCTGGGACCATGCATTGGCTGCCCAACAAGTTTGCCCAATAATGATGCAGCTGCAGCTCTTTGCTGCATAGGGATTTCCTCTTCAAGTGGTAACATAAGTTCTAGAATGTACACTACACCACCATGCTTGGCAGCAGCCCAGGCCAGCTCCGGTGTGCTGGCTAAAGAATAGAGGACAGTAAGGGCTCCATCCCTGCAAGAACGATTGCAGTGCAGTATCTGGAAAAGCAAAATGAGACTTGTTCTTTCTGCAACCATGGCTTCCAAACAAGGCGCATGCTTCGTCAGGAGAGAAAGAACGCTTAGGCAAATTTGTGGGATGTTGCTTTCAGGAGGAACAGGTAGCGCAAGACATTCAAAAAGAGGTGTCAACCGTTCCTTGGAAGCAAAAACAGCAGCCAATCCTGGATTACTGGTTAGAAGATTCTGTAGTGATGTTAGCCCACTTCGGAGGTTCATAATCACTTCAGAATCTCCATCTGTTACTCCTCTATTGTGTTTTTCCAATGAATCTTCTTCTTTTCCTTCATTCGTTGAACCACTGATATCACCATTTTCAGTGACTGATGTCTCAATAGCTGTACCACATTGATGCATCATATTTTCATCCAAACTTAATGAATTCCACTTCTGTACTAGCTCTGCTATAAATTTAAGCAGCGCGATGCAAAAACCTTCCTGGTCACTTATTTCATAATCTGGTTGGTTGTTGTAAACTCTCAAGTACACATTACCAACATTCAGTTCTTTTGATAAAGCTTGGTATGTGAAACAATGTGATTCCGTCAAATCATATGAACCATCAGGTCCTTGGCTAGCACGCTGCTGGTCTACAAATTTGAGGAGCTCGCCTCTGGTGGAAGAATTCCATATGATCTCTGGTGACTCCAAATTTGCATTCAGATTTGACAACAGTTCTTTAGGTGGGTGGTTTCTCAGCATATCAGCAAGCTTCGGAGTAAGAAGCGCTCTTAGTGCATCAAAAGCAGATTGATTAGATGGGCTTATTCCATCACCACCAAGACCACAAAGCCTTGACAGAGCCTGAGTTGCATGTACAGCATGCAGATTTTTAGCAATCTGCACCCTTGCACCAACACCATGTGCTTCACTTGTTGCATTCTCTTCTGCTGTTGAATCGTACTGAAGCAATAGAGGCAACACATACCATAAAAATCCAGCCGCGAGCAGAGAACTTTGCAATTCTGATGACACTGATATATTAGCAGCTGTTTGCAGTGCAGCATCCACAGCCGATGGAACAAATTCAAGTTCTGTACTGTGCACAATATCCTCAACAAGGCCACCAAACTTAAGAATCTCAGCCCTTCCTGACTCAAACTGGCTGAGAACCGCAAATGTATGCATTATGTTGGTGACTATTCTTGCTGCCGGTTCATTTGCTGGGGTTGTGGGCTGAACAATGCACATGCAACGAGAAAGAAGTGTTGCCAACAATGGGATACCACCATCCCGTATGAGCTCTTCGCCATTTAATGAAGATGATGCGCATGTCAGCCAAATTAGCTCTGAAGCAGCTATCAAAAGAGGGGCTCTCTCAGATGAAAGAAAATTGCTATCATCCTTATCTACAGTGACTGCATTTAGCAACATTGGATAACCAGCATACTTGAATGGTTCCAAGACATGTCCATATCTCTTGTACAAGATGCACTGTGCCCTGAGTAAGAGTAGCAGCCTCCAAACTTGTGGTCCCTGCAGTCCCTGCATACTTGCCTGCAATCGTTCGTAAGCCTTTTGCACAGCAACAAACTTTTCTCTTCCCTCAGGATTCTTATCTGGATGGTATTTTATTGCCAGCTTACGGTATTGGCGCTTAAGCTTCTCTTCGTCAATGTTTTCAATGTTGTTTGTCAAATTGCCCGAACTTAACTCAGATGACTGCTTGCTACTGCCGTTCTCACCAAGGACAAGATCATCAAGAGAGATCTCCAGTATCTTACAAGCATCTTCTTCAGATAGATCCATTGGACGACGAGTTAACTCTTCACGCCACATTGCCAACAATGACTGCAAAAACTCTACATGTTCAACAATGGGCCAGTTAGGAAACCTAATCTCGTCACATAGGTTCCGGAGGTAGTATCGGTGGCACCACATCTCATCTTTCAGATTCGGGTAGGTCACAGGTGGCATAGGAGCATAATCATACAATGAATGACAATGTTGAGCCAATTTCTGAGGAAAGTCACCGAGATGCTGCAGGACCTGACGAATTAGATGCTCCGCCCGCATCTTGTGGGTCCATATAATCTCTGGCGTGTCAGAATCAGACACCATTGCGGCAGCAAAAGCTGAAGGTCCACTGCGTTCTAAGACATACAACAATGATTCTGGGAGCAGTCCACCTAGTACACTGCGCTTTGCCAAAGGCAATGATGAAGATACTGCTGCCTCTTCACCACCATGAAATGCCTGATGAGTATGTGTGGCTGAAAAGAGTTGTGCGATCGATAGGAGATTTGAACCGGGATATGCCAATGCAAAGTAAAAGGCACCGGTACTATATAGTCGAATCATAGCTTTGGGGTTTCTTGTGACAATAGCCTTAAGTAATGAGGCAGCTGCTTCAACAATGCTTGGTTCCCCAGTAAGCATAGCCTGAGCAACATGAGGAAGGCATCTTGGACTTGACAATATACGTTTCACCCTAGGAGTTGGTGTCACTATCTCTCCTGCATCATCAAGATCAGAATGTGCAGATGCCATACTGTGTAATATAGACAATGCAGCATCCCCAATCTGACTAGGAGTAAGAACAGGCACTTTAACAGCAAGTGCCCAACGGAGTTCCCGGATATCACGTAATCTTTTCCAGTCAGACATACCAGAAGCCCAACATTTGGTGGTCCAATCAATTGACTTCTTTGACCATAGCCTTCTGATAGCATCCTTTTCTAGAGGGCCAACTTGTTTACCGTCTTTGTCAATATACATCCACTCTTTCAGAGGTTCCATAAATGCAGTTGCCGCGATCAGGTTAGACTGCAAAGGAATAGCTGTCCGCTCAGATGCTTCATGAGCGACAGTTAACATATCAACAGCCAAAACACATCCTCCAACCAAAACACACACTTCAACATTTGAAAGGTCGTTCATCAAGGCCTTTAACAGTAGTAGCAAGCGATGTCTTAATGCCCTATCATCTGTTCTGTCCAAGAGAACAGTAATATGTGCTGTGCCATCGAAAGGTCCAATAACTTTGTTATGTTGTTCATAAACTATAGCCATTGCCCTTGAACAAAGTTCTCTTACAGAAGAACCTCCTCCCCCACCAAAACCATCCAATCTTCCCAAGTCACACCAATCATCAGATGAACCCAGTTCATCAGGGACTGCACCATCCACAGTAAGACCAATGTCTGCATCGCACAAGAAGCGGTGATACAGAGCTCTAAAAAAGGCAACAGGATCACGCAGTGGGAAATCCTGTGCTCGGTAATTGCTTCCACTTTCAAGAAGAAGCCGCAGATAGTATTGGCCCACACAGACTTCTTTGGACAAGCTAGGGTAGCTAACTGAAAACTCAACATAATTCCATGAAATTCGTGGTAAGGTTTCACTATCACTGGCATCCTCAGTGACTGAACTTCCAGGGACAATGTCATCAGTTCGTTCTTTCTCAACATCAAGGCTATGAACTTCAGCTTGCAATGCCTCCCTTAATTCTTGTCTAGTGCGTTCATTCCATATCAAGTCTGCTCTATTGTGATCAAGACTGAATGCTCTCCAAAATCCATACCAGTTGCACAGTAGCCTGCCAGATCCAACAGGTGTGTTTTCCACCACAACCTGTGCAGGGACTGAAAAATCTAAATGTGCAGAGTTAGCAAGGTCACCATTGCCATTGGAGTCCACTAAATAAGCATGTGAATCCAGCTGTGGTGCCCCAGTTTGATGATTATTTTCATAGAAGGCCTCAGGTACAAAACCATGTGGAACTGCCTGAGAAGGATCAATACTTATGCCTGGAGAAGGGGTATATGCAGTAGGGTACTGATTAGCATGCCTCTGATGGACATCTGCTCCAAAGGGACCAACATTGGTGTGCCCAAAAAAATCCCCTTCATTGTTATTTGAGGGCATCCCTTGTTCTGGTACAGCCATACTCTTGCCACCACGGGACCTCCTCTGCTGAAGTATCCGTTTCTGCCTTCTGCTTAATGGTACTTCATCATACTGGTTCTGAGAATCTTCATCTGATCGTGTGTGAAGATAAGCAACAAGTCCAGGGGGAAGTATTCTTGACAGCAAATCCAGTGCAGGTTGATAAGAATCAGCCCAGAGAGCAACAAGCTGTCGACTAACATCACGTCGCTCACCAGCAGGGTAGAAGAAAGCATTCAGTAAATGCCTCAGAAGAGCACCATCCTTCAAGGCAGCATCACGCATGGACTCTGCTGCTATTGCATCTTCTTCAGCAATTGTACGCATAATAACAGAAACAGTCTCCCTCACACTTTCAGCAGGATGGGCAAATAATGCAAACAAACGACGGCGCAAACCAGCGACTTGACGTAGTAGCTCAACAAATGTAGCATGTTGGGTTGTTTCACCATGGGGTTCACAAAGCATAGCTTCAAGGACTTCCACAATGGACAATGACAGTAATGGTGAAACTGATAGTGGCCTTAATCTGTTAACAAGGATTGGAACATAGACTGGTTGTGAGAACAGTACAGACTTTGCATGCATGTAAGTAGCATGTGACTCTCCCCTTGTATCCGTTAACATGGATGTATCACCAGGACCACCACCAATTAGCATAGCCACAAGTCCAGCAGCCTCAGCTGCTACTCCCTCTGAACCATTTCTAAGCAAACCCATTATTCTCCCTACAGCCACAGGAAATGCCATCACGTGTGCTGACACACTTCTTGATGTGAGGAGCCTCCGTAAGCATGCGACAAATCCCATTATTGTCGCTGCTGCTTTTGGTGATGGAGGTGGAAGAGGAGGAGCATCAGCAGGAAGGTTCTGCGGTGTAGCTGGGAGAAGACTAATTAGAGCCATTAGGACCACTTCAGGTACTTCAATATTGACGGGCACTCCAGTATAGGGTATGCATGCATTGAACTCCCTTATTCTACGCCACAATCTGATTTTTGCTCCAGGAACAGTGTCGGATGAAACTACAGCCTCTTTAGCAACAGTAGCTAAATGTTTTATGTGCATGCTAGCAGCTTCCATATCAACAGTGTGATGGGATATGTGAACACGGGCTACTCCACAGGGTGGATCTATGCGATGACCAGGCATGGTCAACCTTGGTAGCACTGGAATGGCACACTGGCTCTGGTTTTGTAAAACATCAAGAACTGTTGCAAGTAAACTATCACGGGATGTACTTGCATATACATGAATCGGGCAACCATCATTGAATTCGAATGCAAACATCTGCGGTTCTTCTGCAAATCGCACAAGGGCACTTACTGTTGAGAGAGGTCGAACAATGATAGCCTCATAATTCTCCGGTCGTCTTTCGACAAGTGAAGTGTTTGTAAGAACAAGCTGTCGAGAAACGGAATCACCATGATCTCCAAGTCCCCCCCTTGGTCCAATACCCAAGCTCAAGCTCTCAATGCTAGCAGTGCCATGTGCAGCAGGACGCAATCTTGTTACTGACCATTCTCCATGCCGAGTTTCAGCAGCTCCAACAGCCTCGTTTGCTCTCTTTGCTATGAAGTCAGTAGCTGTCATTGACTGTGAATTGTCCACATGTAGTGATACTCCAACCATCGAGTTGGCTGTTTTTGTCAAATATGATATAATCAGAGTGTTTGTACTGCCTGAAGCAGCCATAAATGCTTTGGACTTCCTCCCATAAAGGGGGCATAGCACAAAACCTCCTCCTTCAGCAGTCCTCTTCCCATAGCTATCCCCCAAGAGAATGATAGCAGGAGAATCCATATCTCTAAAGTCCAAGCACCAGCGCAGATCACCAGAATGTCCTTCAAGGAGCTCAATGCCCACTGAAGTAACCTTGAGTTTGAAGGGCGCCCACTCGTGGGTGCGGCGGCGGAGGTGGAGGACGGGGAAGTCGAGGACGGGGTGGACGGGGCGCAGGCGGTGGAGCTCGGTGAGGATCCCGGCACGGAGCGGCGAGGAGAAGCGCAGGGCCTTGAACTTGCCGCGGGCGTCGGTGCGGAGGGTGAGCGTGAACTCGGTGGCGTTGCCCTCGGGCGCGGCGCGGTCGAAGCCGTAGGAGGCGTCGTAGGAGTTGGTGACGGCGAGGGTGGCCGGGTCGAGGGTGACGAGGCCGGAGGAGGCGATGCAGAGGATCCGCCTGTACCTGCCCCTCCACGAGTGCTTGACGACGAAGTACCTGGCGAGGTACTCGGGCTCCTCGGCGGCGGCGGAGGAGGAGGAGGAGGCAGAGGAGGCGCGGGGCGAGGAAGGGGAAGACGCGTCGGGCGCCGGCGGCGGGGCGGAGGCGGCGTGGCGGCTGGCGAAGTCCATGGTGGAGAAGTCTATGCGGCGGCGAGCATTAGGGTTCCACCAGTGGAAGGGGAAGAAGGCTCCGGGCGGCGGGGGCTGCGCCGGGGAGTGGCGCGAGTGATTCGCCCCCAGCGCGGCCGATCTGAGCGACGAGATCCCCCACCCGATCCTGGCCGGCGATCGCCCGTTGGGTGGGTCGGTCGGTGCCCCCGCTCTCCGGCGGCGGCGGCGGAGAGATTATCCTCTTCTCGGCTTTGATCGATCGGATTGATTGCGTTTTCCTCCTCTTCTTCTTCGTGCGATCTCGTCTCGTCTCGTCTCAGGTAGAAATCCTTTCTTTGTTTTTTTTTTAATTTAACAAAAACACATGCGCCGGCTTGGCTAATGCCCTTCTCCTTCGTGTTGGTGTCGTGTCGTGTCGTAGCCAGGAAGGAAGGAGAAAGAGAAAGAGTCCCCTCTCCTTGGCTGTATGCCTGTCTCTTTGGGCTTGTTTTTGCC

Coding Potentia
Explanation CPC Score
noncoding (weak) -0.800061
Genome Browser
Expression
Variation
Transcript ID Chromosome Locus Ref Alt
Osa10LNT0081100.1 10 22869526 G A
Osa10LNT0081100.1 10 22861604 A C
Osa10LNT0081100.1 10 22862855 G T
Osa10LNT0081100.1 10 22863229 T C
Osa10LNT0081100.1 10 22865277 A G
Osa10LNT0081100.1 10 22865324 T A
Osa10LNT0081100.1 10 22866220 C T
Osa10LNT0081100.1 10 22866505 G T
Osa10LNT0081100.1 10 22866516 T C
Osa10LNT0081100.1 10 22867856 G A
Osa10LNT0081100.1 10 22869066 C T
Osa10LNT0081100.1 10 22869577 A G
Osa10LNT0081100.1 10 22871183 G A
Osa10LNT0081100.1 10 22872823 C T
Osa10LNT0081100.1 10 22873335 G A
Osa10LNT0081100.1 10 22875360 A T
Osa10LNT0081100.1 10 22872678 A T
Transposon
Transcript ID Transposon ID Chromosome Strand Start End Counts
small RNA targets
Transcript ID MiRNA ID Inhibition Expectation Score Binding Start Binding End
Osa10LNT0081100.1 osa-miR5532 Translation 5.0 20.745 1 22
Osa10LNT0081100.1 osa-miR5795 Cleavage 4.5 12.155 1 22
Osa10LNT0081100.1 osa-miR5807 Cleavage 4.5 20.386 1 24
Osa10LNT0081100.1 osa-miR5817 Cleavage 4.5 16.776 1 24
Osa10LNT0081100.1 osa-miR5817 Cleavage 5.0 17.021 1 24
Osa10LNT0081100.1 osa-miR5821 Translation 4.0 13.347 1 21
Osa10LNT0081100.1 osa-miR166a-5p Cleavage 5.0 15.557 1 21
Osa10LNT0081100.1 osa-miR166c-5p Cleavage 5.0 15.557 1 20
Osa10LNT0081100.1 osa-miR166c-5p Cleavage 5.0 19.594 1 20
Osa10LNT0081100.1 osa-miR166e-5p Cleavage 5.0 15.557 1 21
Osa10LNT0081100.1 osa-miR167a-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167b Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167c-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR160f-3p Cleavage 5.0 14.996 1 21
Osa10LNT0081100.1 osa-miR166l-5p Cleavage 5.0 22.941 1 21
Osa10LNT0081100.1 osa-miR167d-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167e-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167f Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167g Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167h-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR167h-3p Cleavage 5.0 17.301 1 21
Osa10LNT0081100.1 osa-miR167i-5p Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR169i-5p.2 Cleavage 4.0 16.844 1 22
Osa10LNT0081100.1 osa-miR169i-5p.2 Cleavage 5.0 18.251 1 22
Osa10LNT0081100.1 osa-miR171g Translation 5.0 10.934 1 21
Osa10LNT0081100.1 osa-miR166i-5p Translation 5.0 20.557 1 21
Osa10LNT0081100.1 osa-miR167j Translation 5.0 17.823 1 21
Osa10LNT0081100.1 osa-miR416 Translation 5.0 14.166 1 21
Osa10LNT0081100.1 osa-miR426 Cleavage 4.5 21.335 1 21
Osa10LNT0081100.1 osa-miR396e-5p Translation 5.0 18.362 1 21
Osa10LNT0081100.1 osa-miR443 Translation 5.0 16.339 1 22
Osa10LNT0081100.1 osa-miR444a-3p.2 Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR1429-5p Translation 5.0 12.976 1 21
Osa10LNT0081100.1 osa-miR444d.2 Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR444e Cleavage 5.0 18.55 1 21
Osa10LNT0081100.1 osa-miR1857-5p Cleavage 4.5 18.913 1 21
Osa10LNT0081100.1 osa-miR1865-5p Cleavage 3.5 19.123 1 24
Osa10LNT0081100.1 osa-miR1870-5p Cleavage 5.0 19.283 1 24
Osa10LNT0081100.1 osa-miR1877 Translation 4.5 19.932 1 24
Osa10LNT0081100.1 osa-miR1882a Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882b Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882c Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882d Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882e-5p Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882f Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882g Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1882h Cleavage 4.5 18.094 1 24
Osa10LNT0081100.1 osa-miR1883a Cleavage 4.0 11.297 1 24
Osa10LNT0081100.1 osa-miR1883b Cleavage 4.0 11.297 1 24
Osa10LNT0081100.1 osa-miR2090 Translation 5.0 20.133 1 22
Osa10LNT0081100.1 osa-miR2864.2 Cleavage 5.0 13.213 1 21
Osa10LNT0081100.1 osa-miR2873a Translation 4.0 16.311 1 24
Osa10LNT0081100.1 osa-miR2873a Translation 4.0 12.902 1 24
Osa10LNT0081100.1 osa-miR2875 Cleavage 4.0 20.99 1 24
Osa10LNT0081100.1 osa-miR2875 Translation 5.0 18.082 1 24
Osa10LNT0081100.1 osa-miR2876-5p Cleavage 4.5 22.537 1 21
Osa10LNT0081100.1 osa-miR395x Cleavage 5.0 11.951 1 21
Osa10LNT0081100.1 osa-miR5074 Translation 5.0 16.4 1 21
Osa10LNT0081100.1 osa-miR5146 Cleavage 4.5 24.574 1 24
Osa10LNT0081100.1 osa-miR5146 Translation 5.0 23.676 1 24
Osa10LNT0081100.1 osa-miR5161 Cleavage 5.0 13.053 1 20
Osa10LNT0081100.1 osa-miR5494 Cleavage 5.0 15.438 1 21
Osa10LNT0081100.1 osa-miR5505 Cleavage 3.5 12.796 1 22
QTL
Transcript ID Chr QTL Gene Character Major Character Minor Marker Interval1 Marker Interval2
Osa10LNT0081100.1 10 Qbph10 Resistance or Tolerance Insect resistance RM484 RM496
Osa10LNT0081100.1 10 nan Resistance or Tolerance Drought tolerance RM496 RM228
Osa10LNT0081100.1 10 nan Morphological trait Panicle/flower RM171 RM333
pre-miRNA
Transcript ID Pre-miRNA Identity(%) Alignment Length Pre-miRNA start Pre-miRNA end E-value Bitscore
GWAS
Transcript ID Chromosome Locus Trait Value Plus Minus