>Osa11LNT0083800.2

CATATTGAATTTTCAGCATTCACGGAGATGGTTGGATGAAAGAGAGCTAATCATGTTGAAATACGTTTAGGAAAGCTATAATCACAAACTAACAAGAGAACTATTGGAAACGAGCGTTGGCGATTCCTAGCAATTATAAAATGGTATTCTACCTAAAAATACTGTAAAAAAGTACATACATGGGCAAGTTGATTAGGTCATGCACAATGTAGAAATAAGGAGGGTCTTAAGCCCCTTGAGAAGCATTTATACATTGTGGAGGTGATCCTTCTAGGAGGCTTTTGGATGAGCCGTCCTTATGGCTAAGGACCGGCCACAAGGATTAAAAAAAATTAGTTCTCTCTCCGGTTCTGTTGATTGCCGCCATGGAAACGAAACAAAGAGGAAGAAGGCCCGGGGAGGGGAAGTATTGAGCAGTCGAGCAGCTGTGTGGAGTTGTGCTGCAAGCCCTACCGCCGCCGGATTTCGCCCGCAGGCCCCACCGCCACAACCGGAGATCTGTCGCCGAAGCCAACCGCGAGCGCCACAGACGCCGTCCGAGAGGGCCGCTGCGGATCCGCGAGCGCGAGCTCCACCGGCGCCGTACACGAGCGCCTCCTTGGATCCGCTCCCGTGAATGCCGCCGCCGCCGCCGCCGCCACCATCGCGGATCCGCTCGTGACTTGCCACCTTCGTCGTCCGCGAGCGCTGCGCCGACGCATCCTCCTCCGATGAGCGCCTCCACGGCTGTTGGATCCGCGGGCCACCAGCCGCGAGCACCACCGCCATCACGGATCCACGAGCGTGAGCTGCCGGCGGCGTCGTCATCGGTGGCCGGTGGGTGAGGAGAAGCCGAAAGGATGGGGAAATTTTGGGTGGCTGCCGGCTTGGGCGTGCGCCGCGACGACGGCATTCTCCTCTCGCGTCCCGCAGTTGCCCATCTATCTCCTCCTCCTCCTGGTGTTTTTTTATGGTGGTGGT

Explanation	CPC Score
noncoding	-1.11947

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0083800.2	11	960488	G	T
Osa11LNT0083800.2	11	961354	T	C
Osa11LNT0083800.2	11	962201	C	T
Osa11LNT0083800.2	11	962215	A	G
Osa11LNT0083800.2	11	962217	A	T
Osa11LNT0083800.2	11	962242	A	G
Osa11LNT0083800.2	11	962459	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0083800.2	osa-miR1437b-3p	Cleavage	4.5	24.983	1	24
Osa11LNT0083800.2	osa-miR2102-3p	Cleavage	5.0	22.798	1	22
Osa11LNT0083800.2	osa-miR2118a	Translation	5.0	21.981	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0083800.2	11	nan	Morphological trait	Panicle/flower	RM286	RM332
Osa11LNT0083800.2	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus