>Osa11LNT0086400.1

GGGAGAAGAAATACTATTCGGCTATCAAATGGAATGAATGAACTGAAAGAATACAGGAGTAGGAGAGGACATAGACAGATGTTTGCACAAACATAAAATTTGTTCCATTCAGTAGGAAGCGTTGATGGTATTGTGAGCTTAAGAAGAAATGCTACAGGCCACTCCCAAACTTTTGTCACCTTACTGAACATCGTGCACAAAGTAGGGTGTTGTTGCTTGCGATCCTCCACTGTTACCGGCAAGTCCATCACCACGCGACCAATGCCATTCACCACCTCCAGCTCGGTGGTGCTCACCGCCTTCCCCTCAGCATCCAAATCCATGTATACCACTAAGCCCACGAAGAAGACGTAGAAGAGCACGAGCCCGATGGCCTGCCAGAGGTATATCTCGGCGCTAAGGTAGATGTAGAAGAGGCCGGAGGCGGCGAGGAGGTAGAAGAAGACGTCGCGGGCGAACGACGCGGGCGGGACAGCGAACGGCGCGGCGATGAGCGCGACGGCCCCGACGACGAACGCGGAGACGAAGGCTCCGGCGGAGAGGATCGCGGCGAGCCCCGCACGCCGCATCCCGCCGGCCCCGCCGAGCGCGGCGGCGGAGGCGAACGCATCGGGGGCGCCGTTGCCGAGCGCGAGGAGCGTGACGGCGGCCATGGACGGGGAGAGGCGGAGGCGGGCCGCGAGGCGGGAGACCGCGGGGGAGAAGTGGGTCCCCGCGGCGGCGGCGAGGACGCGGAAGTGGAGGAGGAGGAGGAGCGCGAGCGCCGGGAGGGAGGCGCGGCGGTCCCCGCCCAGGAGGCAGGCGTGGATGGCGCCGTAGTCGAGGATGCCCGGCGGGTCGGCGCGGACGGAGGCGGCGCACGCGGCGGCGGCGGCGGGCGCCATGGCCCGATGCGCCGCGGCGGCGCGGTGGTGGTGGAATGGCGAGCTGCCGAGTGGGGAGTGGAGGGAATCGCGGGGGAAT

Explanation	CPC Score
noncoding (weak)	-0.00621202

Transcript ID	Chromosome	Locus	Ref	Alt
Osa11LNT0086400.1	11	2218864	A	G
Osa11LNT0086400.1	11	2219073	A	G
Osa11LNT0086400.1	11	2219645	C	T
Osa11LNT0086400.1	11	2219977	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa11LNT0086400.1	osa-miR5543	Cleavage	5.0	12.0	1	21
Osa11LNT0086400.1	osa-miR1881	Translation	5.0	12.135	1	24
Osa11LNT0086400.1	osa-miR2096-3p	Cleavage	4.5	19.565	1	21
Osa11LNT0086400.1	osa-miR5078	Translation	4.5	22.491	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa11LNT0086400.1	11	nan	Morphological trait	Panicle/flower	RM286	RM332
Osa11LNT0086400.1	11	qDLR11	Resistance or Tolerance	Other soil stress tolerance	RM2596	RM286

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus