© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0092800.1
GTATGCAGCAGCAGATCTTGGTTTCACATGAGTGGATGTTATGGGGGGGTCACTGTTGTCAGTTAAGGGCTGGTTTTTTTGGTAGATGGTGATGGTAGCTGGTGCAGGAAGTGGGGGTCTTGGAGAAGATTGAAAAGATTGGTTGATAGTTGCAATGACAAGACAGAGAAAGAGGGGTTCAGCAAAGCAGCATAACAGGATGGAGAGACAGGTAGGGCAAATAGGTTAATCATGTTCTTGATTCTGAACAGATGATAATACAAACTACTATCTCCATCCTCATAATATAAAGGATTTTGATAATCAAATCATAAGGGGAGTGCACCTCTAAGCTAGGAGATAACAAGAATTCTCTCTCTAATACTTGGCAAGCACGCGCTAGCTAATTGACCCATCTGGACCCTATCTCTGTTCTTCCTGCTGCTCTCTTGTGCGGTTGTGCCCCATGTAGCCCAAGGACCATATGGCAGATGGTCTTGGTTCTTCATTGACAACGAGGCAAACGATAGGAGTTCTGGTACAGTAATAGAGTCTTTTCTCTTCAAATGAAGCTGTGGTTGAGTGGGTGACTAATGGAGGACATAGTGCAGTTATGTTGTTGCTTCCTGTAATTCTCTTAAAATGGCAAAAAACATGTACAATGACAAACTATGCAGTTGCCCTTTTGGCAAAGTGCATCCAGTTCCACATCAGTCCTGAATGGTGACAGCAGCATGTTCATGGACATGATCCTTATAAGTCTGCCACCTGATTATTTTAGATGGGCTTCACTTTGAGGCAAAATCTCAGCAAATGCCTTCTGCAAAGCCTCCTTGGCAGTTTTGTAAATCTCCTCAGATGTTGCACCTTCCTCTGCAAATCTGATACCATCACGGCACAAATCATTACACCGCCAAGCCAAAGACCCTTTTGTGTTTGCCGGAACTTGAGATAATATGTTGTTCTTGGCATTTCTTGTCCACCTCTTCAAAATATAATTTTCAGGAAGCACTGGTATGCCAATAGCTGTCAAAACCCTTAGTGCATGCCGGCACAGCACACCAGCAAACTCAAATTTGTGACAACTGCAAGATACGCTCGCACGTGGTTCACTATAAAGAACAGTGTATCTTATATTGGCATTTTCAGATTGTGTTACCTCAAATCTGCTTATGTCCCCACTTTCAACATTCTGCACCAAAAACCCCGATGATTCAATAAGCTCATCCTGAAACAAGTCAAACATAACTTTGGTGTAGAGCTCTGATGCTTGTTTTTCCATTGGATGTGAAGACTTCATTACCGGCTTGCTACTGAAAGTCGCAAAGTCTTCCTGGAGTTCAGTTTGATAATCCCTTGCTATAGCCTTATCAAACTGAAATGCAATATCTCGCAGGGTAGTGGTAGTGATGGAGCTCCTCTGAAAAAACTTGAACATCGTCTCCAACTTCGGGGCATTGATTATCTCACCAAAGAAGCTATCCTTCAGATAGGCAGGCACCCACTGGTGACGGATACTGTATATTGTTTGCAACCACTCGTTCCCGAAAAGATTGTATTTGCTAAGCAACATCCTCCAAGTCGACTCGAACTCATCGATCCTTTCCAATTCAGTTACACATTCCTTCAATTCATCTTTCAGTGTCGAATGCTCCGAATACAAACTGGCCAATTTCTGCTTGCAGATGAAGAAGATGTCCCGTCGGCAAAACCGGTGCCTAACATCACCACCAAAGACCTTCATGGCAGCCATCTCGACATCTCTACTGTAACCGATCGTGAACGACATCGGCTTCTTCCCACCCATGAAAGCAAGCCATGTCTCGAACAACCACGCGAAGGAATTCTCGCTCTCGTCGGTCATGAGGGCGCAGCCGAACACGATAGCCTGCCTATGATGGTTCATCCCGGTGAACGCCGCGAACGGCACGGCGCGGCGGTTCCTCCTGCAGGTGAGATCGAGCACCACGGCGTCCCCGAACCGTCGGTACAGTGACCTCGCGCGCGCATCCACCCAGATGAAATTGGCAATGCAGCCGCTCCGGTCGATCTGGACGGCGTAGCAGAAGGCCGGATTGTCCAGCTGCAGCTTCCTGAAGTGGTCGAGGAGCCCCTGCGCGACGCCGCCTCCCGGCGCCAGCGCCGCGGCCGCCGCCGCGGCGCCGCCATCCTGTTCGGCCGATGAGGAGTCGTTGGGCTCGGCCGCGTCGGTGGCTGCGGCGTCGGCGGAGGAGGAGGAGGAGGCGAGGGGGTGGGAGTGGAGGAGGACGCAGCGGGAGACGAGCCAGCGGGAGGAAGGGCGGCGGTTGACCTGGAGCATGGCGGGGCAGGCGGCGCGGGCGGAGGCGCGGTTGCGGCGCTTCTTGGAGGCGTCGAGGAGGGTGTCCTTGCGGGAGGGGAGGCCCTGGCGGGTGCACACGAAGCGCCGCATGATGATGGCGTCGTCGATGCGCGACGCGAACGACTTGCTGCTCCGGACGCGGAACCCCGCCCGCGCCGCGTACGTGCAGTAGAACGCCCTCGCCTCCTCCGGCGACGCGAACTCCATCCCCGCCGCCGGCTCCCCCGCGGAGGACGGGCCCGTGACCGCCGCCGCATCCTCGTCGCCCGCGGCGCCCAGCGGCATGACCGCAGTTCGAGGAGGAGGAGGGGAGATTCGTTGCCGGTGAGGGGAGGAGGGCGAGGCGGCGGCGGCCGGCGGCGAGAGGAGAGGAGAATGGGACGCCGGCGAAGTGGGAATGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0092800.1 | 11 | 7786212 | C | T |
| Osa11LNT0092800.1 | 11 | 7786227 | A | G |
| Osa11LNT0092800.1 | 11 | 7788327 | A | G |
| Osa11LNT0092800.1 | 11 | 7785730 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0092800.1 | osa-miR5796 | Cleavage | 5.0 | 20.905 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR6248 | Cleavage | 3.5 | 17.136 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR6251 | Translation | 5.0 | 7.968 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR7692-3p | Translation | 5.0 | 16.54 | 1 | 24 |
| Osa11LNT0092800.1 | osa-miR156a | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156b-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156c-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156d | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156e | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156f-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156g-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156h-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156i | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156j-5p | Cleavage | 4.0 | 19.39 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR156l-5p | Cleavage | 5.0 | 19.39 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR444a-5p | Translation | 3.5 | 17.01 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR818a | Cleavage | 3.0 | 16.879 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR818b | Cleavage | 3.0 | 16.879 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR818c | Cleavage | 3.0 | 16.879 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR818d | Cleavage | 3.0 | 16.879 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR818e | Cleavage | 3.0 | 16.879 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR1857-3p | Translation | 4.5 | 20.909 | 1 | 21 |
| Osa11LNT0092800.1 | osa-miR1859 | Cleavage | 3.5 | 22.742 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR2093-5p | Translation | 5.0 | 22.056 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR2118c | Translation | 4.5 | 16.928 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR2118q | Translation | 4.5 | 16.928 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR2275a | Translation | 4.5 | 14.681 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR2275b | Translation | 4.5 | 14.681 | 1 | 22 |
| Osa11LNT0092800.1 | osa-miR2866 | Cleavage | 5.0 | 13.132 | 1 | 20 |
| Osa11LNT0092800.1 | osa-miR2930 | Cleavage | 4.5 | 22.004 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0092800.1 | 11 | Tid1 | Morphological trait | Dwarf | nan | nan |
| Osa11LNT0092800.1 | 11 | elr11-1 | Physiological trait | Eating quality | RM1812 | RM209 |
| Osa11LNT0092800.1 | 11 | qDLR11 | Resistance or Tolerance | Other soil stress tolerance | RM2596 | RM286 |
| Osa11LNT0092800.1 | 11 | fer11 | Resistance or Tolerance | Cold tolerance | RM3701 | RM552 |
| Osa11LNT0092800.1 | 11 | nan | Morphological trait | Seed | RM332 | RM229 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)