© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0007700.1
CACTATCTTCTCAACTCCTTCAACCTACAGCTTACTCCTCCGCAACAGCTCAGGAAGAACATGCCCAAGTTTAAGCATTATTTGGACTATAACTTGTACAGCTCGGCTCCCATGTTGCGAGTTGCTGAAGCATTTCCTCTCCTACTCCCGAAAGAAACACAGGAGTACACTGGCATGGAGGTGCCGTCCCCTGTGGTGTCACTCGGCATCAGGATATGCTTGGCCCCAGGAGTGAGCTTCATCAGACCAGTTCTTTGCGCTTGCATTTCAGGAATGGCAGCTCTTGCAGCAACATTTTCTGCATTTCTAGATGGACATGCTGCATCTCTTCTGCTGCCAGAAGCTTCTTCAACTATCATCCGTCTTGGATGAGTGAATGCAAAGCTTGGAGAGTTGTGGGGGTGAACCGATGATCCAGCTGAGACCACACCATATGACCGAGGCAAATTAGCATCACTTGTAAGAGATGGACTCCCCAGCAGAACATTTCCATGGTGCTGTGAGCCTGACAAGTAGCTGAATCGATCGTCGTATCGCAATCGATCTCCAGATAATGCATTGGTCGTGGGGAATGAGTGGCTCAAATTCTGAGGGGCAGTGTACCTGATATGTGATTGACTTGGGCTTGCAGAATTTGCTGAAACATTGGGCACACTTTGAGCTTGTAAAGAGAGATAAGGCCGTCCTTGTCGCGGCAATTCCAAGAACAACTTTGTGGGATGGTCTTCAGTATAGAAATGTGTCCCAGACACATACTCTCCTCTGGTTGTAGATACTGAGAGATCTTTGCCCATTAGACGCACAGTTTGTCCAGCAGCAGGCCTACACTCCTGCTGCACACCCATTTCAGAATGAGAACTTGAAGCCACTCCAGTTGATGCATTACAATCTTGGGGAGGAACTTCTCCTTCATTGGAGGGCTGGCTGCCTCCAAGATTCAGATTGAAGGCATAATCACCATGAGACTCAGCAAGTTCTCCTGTCAACTTCCGTGAAGAACCAACAAAAAATGTGTCAGACACTTCCATGAACTCACCGTGCAAAAATGTGCCTGGCGATATTGAACTTCTAGCTCTTTCTAACCCAGACTCAGGAACGGACTGACATTGAAGTCCATGTGAATCCAAAGACAGATCCTGCTGGTTTTGTCGTCCCTCGTCAATAACTTGCACATCAGAGTCTAAAGGCTCATGCTGTCTAGGCTCATGATTTGGATCCTCTGGATTTGACACATATGGGTAGTTCAAATCAGTAGATTCTGGCAGTGCCTCATTCAGATCAAACAAATTGGAGGACAACTGTGTGCTGGTGAGCTCAAGAGAATCCTCATGATCTGTACTCTTGCTTGCTTCTTTAGTTGCTGTCTCCGGCATATGAGAACTACAGCTTTCTGCAGCTATGTGCTTGTCCCCTTCACTGGACATGTCCGTGGATGATGACGACGATGACGCCAAAGCATCCGAGAACAGCTTGCAGATATTTTGCTTGTTAATACCAAGCACATCATCAACTTCTGAGAATTTTACACGCTTCACCGATTTGCGGCAGACTTCAATGACTTCTGTGCCTTTTGGGTCGCCATGTTTCTCCTTGACCATTTTGACAGATGTGTGCCTTGTGTATTTCTTCAGAATACTATGCAAAGGGAGCATTTTCTTCAGGTCATGCTGTTTCCCCACCTTGTTGGTAGCGCTTTTACTCTCGCTGTACCTTTTCTTATCAATCTTCTTGTTGTTGTTCTTATCTAAGTTAGTGATCTTTACCTTCTTCCTTCTCTTTGAGTCTGGAGACCTTTCCTCGTCTGTTCTTGCATGGTGTACACCATCAGGTCTCCTTGACGCTTGAGGAGTATCCAATCCACCAGGCAAATTTGTCTTGTCAAGTGCTTCCTTTATAGTGAAGTTTCCCTCGGAATCACACGTCTCTGCCGCTGCCGCCGCCGTCACCGAAGCAGAAGCAGCCCCCGCCTCCTCCTCCTCCTCCTCCTGCAGCCTCCGCTTCCGCTTCTTCTCCCTAGCTCGCCGCATGATCGCGCAGAGCGCCTCATCGTCGTCGTTGTCGTTCCCGCCGCCGCCCGAATCGGAGGAGGGAAGCGCGAGGGGAGGCGCCGCCGCGAACAGATCCGATATGGACCGCTTCTTCGGCGCCCTCGCCTTCCCCAGCGTCCTCCTTGACGGCTTCGTTGGCGGCGGCGGCGGGGACGGGGATGGGGACAGCGACCAGGGAGGAAGGGGCGGCGCCGTGGCCAGCTCGTCTGCCCACCACCGGAACCTCCTCGCCTCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0007700.1 | 1 | 5579256 | T | C |
| Osa01LNT0007700.1 | 1 | 5580008 | T | C |
| Osa01LNT0007700.1 | 1 | 5580074 | G | C |
| Osa01LNT0007700.1 | 1 | 5580657 | A | C |
| Osa01LNT0007700.1 | 1 | 5581038 | G | C |
| Osa01LNT0007700.1 | 1 | 5583072 | C | A |
| Osa01LNT0007700.1 | 1 | 5583097 | A | T |
| Osa01LNT0007700.1 | 1 | 5583164 | G | C |
| Osa01LNT0007700.1 | 1 | 5583167 | A | G |
| Osa01LNT0007700.1 | 1 | 5583761 | A | G |
| Osa01LNT0007700.1 | 1 | 5583818 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0007700.1 | osa-miR5534a | Cleavage | 5.0 | 6.022 | 1 | 21 |
| Osa01LNT0007700.1 | osa-miR1861n | Translation | 5.0 | 23.093 | 1 | 22 |
| Osa01LNT0007700.1 | osa-miR1873 | Translation | 4.0 | 19.96 | 1 | 24 |
| Osa01LNT0007700.1 | osa-miR810b.1 | Translation | 5.0 | 15.094 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0007700.1 | 1 | qSTS-1 | Others | Others | RM151 | RG532 |
| Osa01LNT0007700.1 | 1 | nan | Morphological trait | Root | RM7383 | RM243 |
| Osa01LNT0007700.1 | 1 | nan | Morphological trait | Root | RM7383 | RM23 |
| Osa01LNT0007700.1 | 1 | Rf3 | Physiological trait | Sterility | nan | nan |
| Osa01LNT0007700.1 | 1 | ppp1.1 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0007700.1 | 1 | prg1.2 | Physiological trait | Source activity | RG140 | RM243 |
| Osa01LNT0007700.1 | 1 | spp1.2 | Morphological trait | Panicle/flower | RG140 | RM243 |
| Osa01LNT0007700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0007700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0007700.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0007700.1 | 1 | gw1a | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0007700.1 | 1 | dn1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | qTNSP-1-1 | Morphological trait | Panicle/flower | RM1 | RG532 |
| Osa01LNT0007700.1 | 1 | qHUS-1-1 | Others | Others | RM151 | RM3746 |
| Osa01LNT0007700.1 | 1 | sp1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | gn1 | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | gp1a | Morphological trait | Panicle/flower | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | qLS1-2 | Morphological trait | Shoot/Seedling | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | qSS1-2 | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | qSSB1-1 | Morphological trait | Panicle/flower | RG532 | G359 |
| Osa01LNT0007700.1 | 1 | ph1.1 | Morphological trait | Dwarf | RM220 | RM272 |
| Osa01LNT0007700.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0007700.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0007700.1 | 1 | qSW1-3 | Morphological trait | Seed | G359 | RG532 |
| Osa01LNT0007700.1 | 1 | nan | Resistance or Tolerance | Lodging resistance | R1944 | C955 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)