© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa11LNT0109500.1
GCGCAGATGGCATGGTGCAGCCGTTGTGCTCTCCGCGACCCGCGTTCGACTCCGGCCGGACGCGCTCACCCTCTTTCTTAATAAATTCGACATTGGGTCCTTCCCCAGTGTCCAGCGTTTTTTTCAAAGTTCAGTTCAAAACAAATCAACCCACACGCTTCTTGTTCTTTGTGTTTTCATACTTGAGAAGGCCTCCAACTTTTTCTATAGGTCAGCAAAAATATCCAATACAAAGTGAGAAAGAAACAATCAAGAGCTTAGCCACTCAAATACAAAACGGGAATGCTGCTGCTGCTGCTGCTACCATGGGGAGAATGAGTAGATTCCAAAGCAATTGTTACTCTAGGAATATGCTGGATCTTGTGCCAGTTTGGATGCCCAATTGTTTTGCAAGACCTCATGAACTCGTCATCGCAGGCCCCCAATCCAAACTCCTCAAGAGATCGGGGCAGCTTTGGAAGCGACTGAATGTTCAAGCAAAAATACATCTTCAGTTCATGGAGTGACATGAGTTGCTCCAGATTATCTGGCAAGAAGTTCCAGCTGCTTTTCCAAAGCCAGAGTGAACGGAGATGAATGAAAAACTCAAAGAGTTCAGGGGCAGGTCCCAGTCGGCTGCATCCACTGAGCTCAAGTTCGCGCAGGTACTTTGGGCCTTTGTGACCTCCGATCATCCAATCTGGGTAGCTTGAACCGTGATAATCTGTTATTTCTAGTCTTTCAAGCTCCAATGGTGGGCAAAGGCCCTCAAGCACCTCTGCCTCAACCTCTGGACTGCAGCTCTCATCATCCCAGACAAGTACCAGTTCTTTCAGGCGTTCCTTGCCATCTAATTTGGCTTCAAGAGCTTCCTCCTTGCTCCCAACGTTTCCAAGACCGTGGATATGTAGCTTGCCACGAAGCTTGTTTAGGTGTCTCAGCTGCTGTAATTCATACCCTGGTTCCTTCTTTACTGGGAACAATGGTAATGTTTGCAGTGACGTTAGCATGCCGATGTTTGGACAATTCAGATCAGCCGTGGCGATTATATGCTGCAAGTTGATGAGATTACTCATGTCTTCGCCAGAGGGAAACACTAAATCTCCACATACACCAAAATCTAGCACATGCATATAGCGAAGCTTGGCAATTGTGTTTGGTAAAACTTGTCTGATCAAGGTTGTCCGAAAACAAAGATGGCGTAGATGCCTCAGTTGACCAATAGATTCTGGGAATGAGAACACATGCGATCCTGTGATGATTTTAACGCTCAGTACCCGCAACTTCCTCAGCCTCATGAACATTCTTTCAAATATCTTTTCTTCAGTTGGTATTTCTGTATTGCCACTATAAATAATCAGAGTGCGTAAATTTCCCATTTTCAAAACCTTTTCAGTAATCATCGTTTTATTATAACTCTCGATATAAAGGTGGCGAACATCTCCAGGAAGATCTCCTGTCCAGCCATTCTCAACTTTGAAGCAATCATTTCTAGCAACCTTCTCTGCTAAATCGTGAAGCAGATCATGAACCGTGAAGTATTCGGAGGCACCAAACCTTTCTGCTTGTTTTTCTCCTAGTTGCAGAAATGAGGCTGATACCAATTCCTCAAAGTACTTTCTACCAACAGCCTCCATTTCTAATCCTACTTCAGTAGTCGTTATAAACCCTTCTGCCACCCACAAGTTAATTAACTCATGGCGTTCCAGCCGATGTCTTCTGGGGAAAATACTGCAGTAAGCAAAGCACCGTCTTACCTGCTGATCAAGGTGCTGGTAGCTCCACCATAGAGCTCCCATTGTCTCATTCAAGAGGTTCTGATTTCGAGCATCTTGCCAAAAGTCAATTGTTGGTCTCATGTGTAGTTGCCCTCCAACTGTTCTGGCTGCCAGAGGTGATCTCTTCAGCTTTTTTGCAATGTCAGATCCTATAGCTCTGAATATCATCCGATCGCGTTCATCTATGCCTGCACTGTCGAGAGCATAGTGCATGAAAAGTTCAAGGAACACAGTGTCATCCAATTCAGATATCGGAATACATTTTGCAGCACCCAAAGCTAATAATGCATCTCTAGTTCGACTAGTTAGTAGGATCTTACTTCCTAAAGCCCCAACCTTAAGTGGAAAAAGAATCTTTTGTAGCTCCTCCTGACTGTCATCCTTGTTGTACCATACATCATCTAGTACCAAAAGGAACCGTTTTCGACTCAATGCCTGTTCCAGCTTCTGCTCTAGGGTGTTAAGACTATTGAACTGAGGGCAAGAGTTCCCTGTAGCCTCTTCAAGCATCTTACTGAAAATCTTATCCACATTAAAATTCCTAGAAACATGAACCCACATGATAAGGTCGAAATGGCCAGCCTCTTTCTCTTGCCTGCCCCTTTTCTCATGGGCACAAACATACTGTGCAAGGGTAGATTTCCCGGACCCAGGAATGCCATGGATGCCAATGATGGAATGGGATAATGCACGACTGGGTTCATGTTGACCATCATTTTCTGTCTCATGAAGCAATACTAAGATCTTATCACGATCTTCATCTCGGCCAATTACTACAAATGGAGGAGATGCAGTAGTGACTGCAATACGTGAATCGTCAGAAACAGTTTGTCTCTTGTTGATATTACTGTGGCCTGGCAAATTCAGAAGCTGCAAAATTTTGTGTCCATCGTTGATAATATTTTCTATCTTCTTTAGGATTTTCTTCAACTCCAATTTTGACATATTAGGAGGAGGAGCATCTGAAGGCTGGTTTTTTATGCGGACGCTCTTCGGTAGGGCAGACTGGAGCATCTACACCAAATTCCTCCTACGAGGAGGCCTGCCGTTTGACTCCAAATTGTCATCAGGCTGAGATGAGATCTGCCTTTCAAGACGGTGATACTCAATATCATCCAAGATGTCTTCAGCTTCATAGACAGCCGACCTAAGCTGCTGCAACCATTCCTCCAAACGGCCCCTGTGAGGACTCTCCTCAACTGCTTCCAGCACTAGTTCCAGCTGTAGAACTTTAGTCTGAAGTTGTTTCAGCTTCTCTGATCCATGAAAGCCGAGGTAGGAGAAGCCTTTGTTGAGGATCTTGGTGATGATCGGTGAGACGACCCAACCTACAGCAGATATGCCCCAGCCAACTGCGGCCACCTCCGCCATCCGACGCTCACAGCAAGAGGAGAGGGGGGAATTGGGGATGGGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa11LNT0109500.1 | 11 | 26954275 | A | T |
| Osa11LNT0109500.1 | 11 | 26953036 | G | A |
| Osa11LNT0109500.1 | 11 | 26953064 | C | G |
| Osa11LNT0109500.1 | 11 | 26953067 | C | T |
| Osa11LNT0109500.1 | 11 | 26953086 | T | C |
| Osa11LNT0109500.1 | 11 | 26953106 | T | C |
| Osa11LNT0109500.1 | 11 | 26953202 | T | G |
| Osa11LNT0109500.1 | 11 | 26953463 | A | G |
| Osa11LNT0109500.1 | 11 | 26953764 | T | C |
| Osa11LNT0109500.1 | 11 | 26953959 | C | G |
| Osa11LNT0109500.1 | 11 | 26954005 | A | T |
| Osa11LNT0109500.1 | 11 | 26954084 | T | C |
| Osa11LNT0109500.1 | 11 | 26954140 | T | C |
| Osa11LNT0109500.1 | 11 | 26954416 | T | C |
| Osa11LNT0109500.1 | 11 | 26954820 | T | C |
| Osa11LNT0109500.1 | 11 | 26955338 | C | T |
| Osa11LNT0109500.1 | 11 | 26955640 | A | G |
| Osa11LNT0109500.1 | 11 | 26955665 | A | G |
| Osa11LNT0109500.1 | 11 | 26955558 | T | A |
| Osa11LNT0109500.1 | 11 | 26958519 | G | C |
| Osa11LNT0109500.1 | 11 | 26958675 | T | G |
| Osa11LNT0109500.1 | 11 | 26958747 | A | G |
| Osa11LNT0109500.1 | 11 | 26959000 | T | G |
| Osa11LNT0109500.1 | 11 | 26959029 | A | G |
| Osa11LNT0109500.1 | 11 | 26959038 | G | T |
| Osa11LNT0109500.1 | 11 | 26959141 | A | G |
| Osa11LNT0109500.1 | 11 | 26959193 | T | C |
| Osa11LNT0109500.1 | 11 | 26959200 | A | G |
| Osa11LNT0109500.1 | 11 | 26959215 | G | A |
| Osa11LNT0109500.1 | 11 | 26959226 | T | C |
| Osa11LNT0109500.1 | 11 | 26959227 | G | A |
| Osa11LNT0109500.1 | 11 | 26959286 | T | G |
| Osa11LNT0109500.1 | 11 | 26959341 | A | G |
| Osa11LNT0109500.1 | 11 | 26959378 | C | G |
| Osa11LNT0109500.1 | 11 | 26959452 | T | C |
| Osa11LNT0109500.1 | 11 | 26959582 | T | C |
| Osa11LNT0109500.1 | 11 | 26959779 | A | G |
| Osa11LNT0109500.1 | 11 | 26959886 | G | A |
| Osa11LNT0109500.1 | 11 | 26959895 | T | C |
| Osa11LNT0109500.1 | 11 | 26959918 | T | C |
| Osa11LNT0109500.1 | 11 | 26959928 | A | G |
| Osa11LNT0109500.1 | 11 | 26960145 | T | A |
| Osa11LNT0109500.1 | 11 | 26960481 | A | G |
| Osa11LNT0109500.1 | 11 | 26954702 | T | A |
| Osa11LNT0109500.1 | 11 | 26955360 | T | C |
| Osa11LNT0109500.1 | 11 | 26953338 | T | C |
| Osa11LNT0109500.1 | 11 | 26960165 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa11LNT0109500.1 | osa-miR5792 | Translation | 4.5 | 14.025 | 1 | 24 |
| Osa11LNT0109500.1 | osa-miR5802 | Translation | 3.5 | 14.326 | 1 | 24 |
| Osa11LNT0109500.1 | osa-miR5512b | Cleavage | 4.5 | 13.955 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR6253 | Cleavage | 5.0 | 17.776 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR6253 | Translation | 5.0 | 19.138 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR156j-3p | Cleavage | 5.0 | 23.515 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR159e | Translation | 4.5 | 19.718 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR1423-5p | Cleavage | 3.5 | 15.641 | 1 | 24 |
| Osa11LNT0109500.1 | osa-miR1438 | Cleavage | 4.0 | 20.515 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR1860-5p | Cleavage | 2.0 | 19.894 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR1864 | Translation | 4.5 | 7.758 | 1 | 24 |
| Osa11LNT0109500.1 | osa-miR2096-3p | Translation | 5.0 | 18.233 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR2118a | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118b | Translation | 4.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118c | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118e | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118f | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118g | Translation | 4.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118h | Translation | 5.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118i | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118j | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118k | Translation | 5.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118l | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118m | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118n | Translation | 4.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118p | Translation | 5.0 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118q | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR2118r | Translation | 4.5 | 23.205 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR5149 | Translation | 4.0 | 18.417 | 1 | 22 |
| Osa11LNT0109500.1 | osa-miR5339 | Cleavage | 3.5 | 11.298 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR5491 | Cleavage | 4.0 | 12.902 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR5512a | Cleavage | 4.5 | 13.955 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR396a-5p | Translation | 5.0 | 23.076 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR396c-5p | Translation | 5.0 | 23.076 | 1 | 21 |
| Osa11LNT0109500.1 | osa-miR396b-5p | Translation | 5.0 | 23.076 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa11LNT0109500.1 | 11 | FON3 | Morphological trait | Panicle/flower | RM4601 | RM1233 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)