© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0117800.1
TTTCACACATATATATTTTTGCCCTTTTTTTTGGCACCATCATACAGAAACTATTTGTCATATAATGCATACATTTTCACTTAATTTTTGTTCCGCTAATCAAACAGTTTCTGCAATTGATCTAATTTTGCTCTCGTCCTTCTGGTCATGTAGCTACATTGTTCTCCCTGACACAAATGGAAGAACAGCTTCCGTGCTAACTTAAAATGGATTCTCTTCAATGTTGGAGACTTGATCGAAGCAATGATCTGAATTTTCTGAATTCTGACATACATACAGCCTACGGATTTAATCTTTCTTGAGGAGATCGTAGAACACTTCAGGCTTCTTGTAGTGCTTCTTGCACGCCTCCTGCATTGCAAATGCTATGTGGAGCAGAGTCGCCTCGGACCACGGCCTGCCGATGAACTGGAGGCCGATGGGCAGCCCGGCTTTGTCATACCCAACCATGACGGTGATGGCCGGCAAACCAAGGAAGTTTCCTGCAATTGAGTACCGGACCAACGCGGCTCCATTTATGTAGTCCAGTTCTCCGCTTTTTAGCGCGTCGTCTTGCAGCTTGTAGGCAGTCACACCGGTCATTGGTGAGACGATCACGTCTGCCGTCTTGAATATCTCCTTGTGGAAGTACATCTGACGATTCCGGAGCCGTTGCGAATTCAGGTAGGCTCTACTGCTGAAGGAACCATACACGCCAAGTGCGACCCTTACATCCCAACCGATTTCAGATCTCTTCAGCTTGTCAAGATATTTAGCAAGTGATGCAGTGCATTCTGAACCAATTGTCACATAGTGCGCAAGGCGCATCTCTTCGATCTCCGGTATGGTTACATCCAGAGTCTCCCAACCATAGTGCGCATGCAGCATCTGAAGAGATTTGTCGCAGCAGCTTCTGATGTCCTCTGAACTGTCATTGAACCACTTTGCATATTTTGCAAGCTTGATGTTCTTGATGGAGAGTGAAGACTTCAGCAAGGGCAGATTCAACTCAGGCCGCAAGTAGGATGGCTGAGACTGATCAACAATTGCTGAGTATGCGACGGCGGCGTCCTCGACCGTCCCAGCGAGGATCCCGGGCATCCCGACCGTCCAGTTCAGCGGCAGAACTCCGGCGTTCGACAGCCGCCCCGCCGTCGGCTTGAACCCGACCACGCCGCACAGCGCCGCCGGCATTCGCACGGACCCTCCGCCGTCGACGCCGAGGGCGACGGGGCAGAGGCCGGCGCAGACGGCGGCGGCGGAGCCGCTGGACGAGCCGCCGGAGACGCGGCCGGGGTTGTGGGGGTTCCTGGTGGAGCCGTGGTGCGGGTTGATGCCGCTGGTCCCCGCGCCGAGCTCGTGCATGTTGGTCTTGCCGGCGAGCACCGCGCCGCACGCGCGCAGCTGCGCCACCACCGCCGCGTCCGCCGCGCACGCCCGCGCCCGCCCCAGCCACCGCGTCCCGCCTGTGGTTGGGTAGGGCAAACAGTCGATCTCGTCCTTGACAGCGACCAGTATCCCGTCCATGGCAGACAGAGGTGTCCCTCTCTGGTATCTCAGGGTGGATTCTTCAGCCTGCCTGATGATGTCTTCAGGGCTGTAGCTGATGAAGAAGGCCATGTTGAGGCCTGGGCCTGAGCACTCCTTCACTGCAGCCAAGAACCTCTTTGCAACCTGAACAGGAGTGACCTCCCCTGAGCTGTACGCCCTGTTGAAATCCCTGATCGTCCAGCGTTTCGGGCTCGACGGCGGCGAGCCGGCGAGGGTCGATTCGAGGCTCGCAGGGAGGCAGCTGACGGCTTCCTGGACACGCTCCGGCGGCGACAGGTCCGGCTTCGTCAGGCACACATTCTGCTCTGGAATGTCTTCCCAGCTGTGTGTGGAAGTGAACAGTGGAGGCTCTGGGATTTCAGCATCTTGGACAAGCTTGTTGATGAGATTATCCTTCTTGAGGATGTAAAGCACCATTGAGCCGATGATCGGCATCTCAAGAATCCACACGAAGATCTTCACCAGCAGCCCTGCTACCCGAGGAGCTTTGACGTTAGGGCTGATGTAGAACTCGTCGCTGTCCGGGCCGAGATTGACCTCGGCGGCCGGCTTGTACACCTTGGCGGCCATGGATGGCAACTTGGGAAGCAAAGGAGACTCTCCTCTGCACAACGACTGCTGCTAAGCTCCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0117800.1 | 12 | 3503460 | T | G |
| Osa12LNT0117800.1 | 12 | 3503425 | T | G |
| Osa12LNT0117800.1 | 12 | 3503508 | C | A |
| Osa12LNT0117800.1 | 12 | 3504134 | C | A |
| Osa12LNT0117800.1 | 12 | 3504768 | A | C |
| Osa12LNT0117800.1 | 12 | 3505408 | A | T |
| Osa12LNT0117800.1 | 12 | 3507029 | T | C |
| Osa12LNT0117800.1 | 12 | 3507771 | T | G |
| Osa12LNT0117800.1 | 12 | 3506618 | A | C |
| Osa12LNT0117800.1 | 12 | 3505571 | A | T |
| Osa12LNT0117800.1 | 12 | 3505600 | C | G |
| Osa12LNT0117800.1 | 12 | 3506574 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0117800.1 | osa-miR5538 | Translation | 5.0 | 14.765 | 1 | 22 |
| Osa12LNT0117800.1 | osa-miR5807 | Cleavage | 4.0 | 22.424 | 1 | 24 |
| Osa12LNT0117800.1 | osa-miR7693-5p | Cleavage | 4.5 | 24.029 | 1 | 24 |
| Osa12LNT0117800.1 | osa-miR160a-3p | Cleavage | 4.0 | 21.948 | 1 | 21 |
| Osa12LNT0117800.1 | osa-miR169r-3p | Cleavage | 4.5 | 21.643 | 1 | 21 |
| Osa12LNT0117800.1 | osa-miR169r-3p | Cleavage | 5.0 | 16.712 | 1 | 21 |
| Osa12LNT0117800.1 | osa-miR1851 | Translation | 5.0 | 20.188 | 1 | 21 |
| Osa12LNT0117800.1 | osa-miR160b-3p | Cleavage | 4.0 | 21.948 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0117800.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0117800.1 | 12 | Pi-4(t) | Resistance or Tolerance | Blast resistance | nan | nan |
| Osa12LNT0117800.1 | 12 | gy12 | Morphological trait | Seed | RG869 | RG98 |
| Osa12LNT0117800.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Osa12LNT0117800.1 | 12 | nan | Physiological trait | Eating quality | RM20 | RM101 |
| Osa12LNT0117800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0117800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)