© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa12LNT0126800.1
GATGACTCCGCCGCCGCGCTACTTGCTCCGTGCCTCCTCCCTCTTTCCCCGACGGAGATGAGGTAGTTCCCCACCGCCACCGCACTCCACCGCGGCCTGCCCTCGCCGGCGCTGCTCACCCTCGCGTCGATGGATCCGACGCCCTACGCCCACCGCCCTCCAGCCATCCGCTGCCGTCTGGCGTCTATCGCCGTCAGTATTGGATGCAGGCCGCTGCCCCGGCGTCGACTGCTCTCACTATTGGATCAAGGCCGTCAACCACCGTCGGGCGTCATCCACTGCCACGGCCGCCCGCCGCCCAATCGAGCAGGCCAACACCCCATCTCCAACGCCTGCGAGCCTTGTAGGTGAACCATGTACAGAGGATGCTGGTGGAGGTGTGGGGGCTAATCACTAATCAAACATATTTTCGTGGATCTAACTTATTACCTGAGTTCTCCTCTTTGGTGATGGAGCCGGTTCAGGTGCCCTGTATGCCTGTAATGGAATAGTTGCCACATCCCCAGGAAATCAAGTAATTTAAATACTTCTCTATTGAATAAACTACATAAACGACATAACGGTGATTCAGTAGTTTTTATCATTATAGTTGTTATCGTTGTTTTTTTGCTGGTGACGGTGCTCTTATACTGATAATGCATAATGAATCACTGTGCCATGAGTAAAATCTGTTTTATTGTAGAAGGAGTAAAAACTGTTCACTTGTTGCGTTAATGTGTCCCTGACTCCCTGACATGTCAAGGAGACTGACAAAAGGATTTGAAATATTCCAATCGATGTGGTACTTCTTCACTAATTCGTTATCAGAATGGTTCCAATGATGCAGCATAGGAGGAGGAAGAAGGTTCAAAATTCAAGCACAATGGAAGTCGGCAAGCACACATGTGGATTCAGATATGCAGTGAATAAACAAAGAAACAGTCTATTTCTGCCATAAAAGATTTTTTTGGACATGATATTTCTGCCATTAAAGATTGGCAATTGAACGAACGAATGTGTATGACCCCACCCACACGTCGACGCCCATGTTGATTTAGATTATTCTAGGTAGATAACATTGTACTTTTGTGGCGCTTTGTAGGCATGGTCTGTTGCATACACTGGTCGTTGTAGATGCTGAATGCATCGTCGAATTAAGCTAGGAATGTGATTGAGGGGCCGATGATGATTATGGTGTTTGTCACGAGTAACATTGACCTGATGGTGCCGGCGTTCAACACAACGGGTGACTAGTTGAATGGTCAAGCGGCTGCTTACGCTGGTGCCTAGGTTGGTAGACCTGGCGTGCTCAAGATCACCAGCGCGGTGAGCATCTCTGCCACCGATGCTAGGTGGTTGCTGAGGTGATGTTCTTCAACAGTGGGATCCCATTGCTGCTCATTGTCGAATGGGATGGCAAGCCAGTTGGTGATGGTACCTAAACTAAGTTTTGATTAATTGGAGCAGTGCTGATTGGAAAGAGAATATTATTGGAGCAATATTATTGGGAAAATGTATTTTGTGGGAGCAGTTTGGCAAGGGTTTTATTGGAGCAATTCTGGTTGGAATTATATTTGTATCGGATCAATACTGATTGGAAAGGATTTTATCAGACCAATGTTGATTAGGAAGGTTTGTGTAAGTGTGGTCAGAAGTTTATCCCTTCGCAATTCAATAGATTCACTCTATTATGCTTACAAGAACTAATGTGCTTTTTTTTTTGAAAGAATTATTTTCTTTGAGATCTTGATGTTTCTTGTCCAGGCATTCCCATGAGTTGCAAATCCAAGGAAGTTGATAACACCCATAGTCTCATACAATGGAAAGTTAACCTTTCTGCAATATTTCAGTTTGTCTCAACTTTCAATTAGCACAAACCGCTGCAGAGGCCAAAGCAACAAAAGCCATTTTGGCACAGTTGCAGTGCCTAGAAAACATCAGAAATTGAGAAGAATATATACTTTGTGTGGTGAATGTGAGCTTGAAGTGCAAGAAGGTAGATGAGCAGTTAGACCTTTCTCAGAAGTAAAGCGTCTTCAAGCACAACTTCTGGCTTTTGGGAGTCTCTGAGATCGACATGTTCCTAGCTAATCGATTTATCAACTTCAATATCATCATTTAGTAAACTTATAGTACTTTGTTAACATGGAATTAGGTGTGTGACTTCTAAAGTTATATAAAGTATCATCAAGAGTAAAGTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa12LNT0126800.1 | 12 | 13488916 | T | C |
| Osa12LNT0126800.1 | 12 | 13487365 | T | C |
| Osa12LNT0126800.1 | 12 | 13487394 | A | G |
| Osa12LNT0126800.1 | 12 | 13487525 | A | G |
| Osa12LNT0126800.1 | 12 | 13487533 | A | G |
| Osa12LNT0126800.1 | 12 | 13487613 | G | A |
| Osa12LNT0126800.1 | 12 | 13487648 | T | C |
| Osa12LNT0126800.1 | 12 | 13487773 | A | G |
| Osa12LNT0126800.1 | 12 | 13488162 | A | C |
| Osa12LNT0126800.1 | 12 | 13488805 | C | T |
| Osa12LNT0126800.1 | 12 | 13489848 | C | T |
| Osa12LNT0126800.1 | 12 | 13489493 | T | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa12LNT0126800.1 | DTM_#DNAt_MULE_japo_Os0089 | Chr12 | + | 13490723 | 13491466 | 10 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa12LNT0126800.1 | osa-miR5534a | Cleavage | 4.0 | 24.948 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR5534b | Cleavage | 4.0 | 24.948 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR1440b | Translation | 4.5 | 7.333 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR6250 | Translation | 5.0 | 13.017 | 1 | 22 |
| Osa12LNT0126800.1 | osa-miR166h-5p | Cleavage | 4.5 | 22.679 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR414 | Cleavage | 5.0 | 17.433 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR417 | Cleavage | 5.0 | 14.501 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR396e-5p | Cleavage | 5.0 | 15.146 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR2099-5p | Cleavage | 5.0 | 16.113 | 1 | 22 |
| Osa12LNT0126800.1 | osa-miR396g | Cleavage | 5.0 | 15.146 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR5148a | Cleavage | 4.5 | 13.179 | 1 | 24 |
| Osa12LNT0126800.1 | osa-miR5148b | Cleavage | 4.5 | 13.179 | 1 | 24 |
| Osa12LNT0126800.1 | osa-miR5148c | Cleavage | 4.5 | 13.179 | 1 | 24 |
| Osa12LNT0126800.1 | osa-miR396h | Cleavage | 5.0 | 15.146 | 1 | 21 |
| Osa12LNT0126800.1 | osa-miR396d | Cleavage | 5.0 | 15.146 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa12LNT0126800.1 | 12 | nan | Morphological trait | Seed | RG543 | RG81 |
| Osa12LNT0126800.1 | 12 | nan | Physiological trait | Eating quality | RM247 | RM179 |
| Osa12LNT0126800.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126800.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126800.1 | 12 | qtl12.1 | Resistance or Tolerance | Drought tolerance | RM7195 | RM28166 |
| Osa12LNT0126800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126800.1 | 12 | nan | Resistance or Tolerance | Other soil stress tolerance | RG9 | RG241 |
| Osa12LNT0126800.1 | 12 | qDLA-12-3 | Resistance or Tolerance | Blast resistance | RG463 | RZ816 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)