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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0358100.1 6 Osa06LNG0358100 28208657-28234184 long non-coding(lnc) isoforms of known genes 10449 40.24309 39
Osa04LNT0276100.1 4 Osa04LNG0276100 28224389-28240959 long non-coding(lnc) isoforms of known genes 4544 43.06778 39
Osa02LNT0163100.1 2 Osa02LNG0163100 15943081-15974239 long non-coding(lnc) isoforms of known genes 6184 42.17335 38
Osa10LNT0069300.2 10 Osa10LNG0069300 13231204-13255006 long non-coding(lnc) isoforms of known genes 4840 43.30579 38
Osa11LNT0101100.5 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5290 43.76181 38
Osa11LNT0101100.7 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5209 43.88558 37
Osa01LNT0022000.1 1 Osa01LNG0022000 19303393-19319879 long non-coding(lnc) isoforms of known genes 5296 41.61631 37
Osa10LNT0069300.1 10 Osa10LNG0069300 13231204-13255006 long non-coding(lnc) isoforms of known genes 5725 41.90393 37
Osa07LNT0390800.1 7 Osa07LNG0390800 26886336-26908536 long non-coding(lnc) isoforms of known genes 12113 44.4316 36
Osa02LNT0148600.4 2 Osa02LNG0148600 4195375-4209110 long non-coding(lnc) isoforms of known genes 4366 45.05268 35
Osa08LNT0420400.1 8 Osa08LNG0420400 25652873-25663757 long non-coding(lnc) isoforms of known genes 3913 44.41605 35
Osa11LNT0101100.4 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5348 43.56769 35
Osa11LNT0101100.3 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 5413 43.58027 35
Osa11LNT0085300.1 11 Osa11LNG0085300 1718538-1735147 long non-coding(lnc) isoforms of known genes 5952 42.69153 35
Osa02LNT0148600.1 2 Osa02LNG0148600 4195375-4209110 long non-coding(lnc) isoforms of known genes 4530 46.66667 35
Osa01LNT0034800.1 1 Osa01LNG0034800 29652588-29669044 intergenetic lncRNA (lincRNA) 5660 40.31802 34
Osa05LNT0301600.2 5 Osa05LNG0301600 13064221-13078062 long non-coding(lnc) isoforms of known genes 7632 44.41824 34
Osa05LNT0301600.1 5 Osa05LNG0301600 13064221-13078062 long non-coding(lnc) isoforms of known genes 7648 44.41684 34
Osa03LNT0232600.2 3 Osa03LNG0232600 29889651-29893189 long non-coding(lnc) isoforms of known genes 3357 43.96783 34
Osa01LNT0052800.1 1 Osa01LNG0052800 39960257-39975893 long non-coding(lnc) isoforms of known genes 5724 43.90287 34
Osa06LNT0362900.1 6 Osa06LNG0362900 31184955-31197808 long non-coding(lnc) isoforms of known genes 5805 44.8062 33
Osa08LNT0424500.2 8 Osa08LNG0424500 28173373-28181759 long non-coding(lnc) isoforms of known genes 3473 44.14051 33
Osa11LNT0101100.2 11 Osa11LNG0101100 18552567-18570136 long non-coding(lnc) isoforms of known genes 6410 42.35569 33
Osa02LNT0148600.2 2 Osa02LNG0148600 4195375-4209110 long non-coding(lnc) isoforms of known genes 4758 44.32535 33
Osa03LNT0195100.1 3 Osa03LNG0195100 1582178-1596130 long non-coding(lnc) isoforms of known genes 5457 40.55342 33
Osa07LNT0384900.1 7 Osa07LNG0384900 22634760-22645823 long non-coding(lnc) isoforms of known genes 5757 44.90186 32
Osa01LNT0041300.1 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 3819 42.47185 32
Osa02LNT0148600.3 2 Osa02LNG0148600 4195375-4209110 long non-coding(lnc) isoforms of known genes 4563 46.41683 32
Osa11LNT0104800.2 11 Osa11LNG0104800 21500589-21516452 long non-coding(lnc) isoforms of known genes 4254 44.61683 32
Osa11LNT0104800.1 11 Osa11LNG0104800 21500589-21516452 long non-coding(lnc) isoforms of known genes 4132 44.48209 32
Osa04LNT0275500.1 4 Osa04LNG0275500 27795857-27815440 long non-coding(lnc) isoforms of known genes 8683 44.85777 31
Osa06LNT0338400.1 6 Osa06LNG0338400 9266839-9278517 long non-coding(lnc) isoforms of known genes 3124 42.54161 31
Osa01LNT0041300.3 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 4633 41.31232 31
Osa06LNT0330900.1 6 Osa06LNG0330900 4167296-4183929 long non-coding(lnc) isoforms of known genes 4710 45.138 31
Osa07LNT0380500.1 7 Osa07LNG0380500 18338217-18351612 long non-coding(lnc) isoforms of known genes 4216 45.5408 30
Osa01LNT0041300.2 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 4902 40.45288 30
Osa08LNT0424500.1 8 Osa08LNG0424500 28173373-28181759 long non-coding(lnc) isoforms of known genes 3278 43.59365 30
Osa01LNT0021900.1 1 Osa01LNG0021900 19178310-19192331 long non-coding(lnc) isoforms of known genes 3821 46.66318 30
Osa12LNT0114600.2 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4957 41.59774 30
Osa12LNT0114600.1 12 Osa12LNG0114600 1675882-1689767 long non-coding(lnc) isoforms of known genes 4953 41.57077 30
Osa07LNT0366500.1 7 Osa07LNG0366500 2882846-2892741 long non-coding(lnc) isoforms of known genes 4757 47.31974 30
Osa04LNT0260500.3 4 Osa04LNG0260500 19695374-19709946 long non-coding(lnc) isoforms of known genes 4013 44.80439 29
Osa01LNT0052300.1 1 Osa01LNG0052300 39879458-39890856 long non-coding(lnc) isoforms of known genes 5113 44.76824 29
Osa04LNT0260500.1 4 Osa04LNG0260500 19695374-19709946 long non-coding(lnc) isoforms of known genes 3917 44.93235 29
Osa03LNT0224400.1 3 Osa03LNG0224400 23369001-23384101 long non-coding(lnc) isoforms of known genes 4347 43.45526 29
Osa03LNT0224400.2 3 Osa03LNG0224400 23369001-23384101 long non-coding(lnc) isoforms of known genes 4710 42.99363 29
Osa04LNT0281300.1 4 Osa04LNG0281300 31502901-31515441 long non-coding(lnc) isoforms of known genes 5619 44.10037 29
Osa04LNT0281300.2 4 Osa04LNG0281300 31502901-31515441 long non-coding(lnc) isoforms of known genes 5522 43.6255 29
Osa04LNT0276500.1 4 Osa04LNG0276500 28575712-28591277 long non-coding(lnc) isoforms of known genes 4886 42.81621 28
Osa02LNT0164100.1 2 Osa02LNG0164100 17046808-17058399 long non-coding(lnc) isoforms of known genes 2866 44.62666 28