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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0026600.1 1 Osa01LNG0026600 24155649-24162572 long non-coding(lnc) isoforms of known genes 4030 44.83871 14
Osa01LNT0026600.2 1 Osa01LNG0026600 24155649-24162572 long non-coding(lnc) isoforms of known genes 1109 57.98016 3
Osa01LNT0002600.1 1 Osa01LNG0002600 2415657-2418970 sense lncRNA 1485 51.17845 3
Osa01LNT0026500.1 1 Osa01LNG0026500 24168245-24171714 long non-coding(lnc) isoforms of known genes 1190 53.10924 6
Osa01LNT0026700.1 1 Osa01LNG0026700 24245817-24249378 long non-coding(lnc) isoforms of known genes 1764 46.65533 11
Osa01LNT0026700.2 1 Osa01LNG0026700 24245817-24249378 long non-coding(lnc) isoforms of known genes 1756 46.64009 11
Osa01LNT0026800.2 1 Osa01LNG0026800 24354170-24360437 long non-coding(lnc) isoforms of known genes 1747 45.62106 12
Osa01LNT0026800.1 1 Osa01LNG0026800 24354170-24360437 long non-coding(lnc) isoforms of known genes 1633 46.29516 13
Osa01LNT0027000.1 1 Osa01LNG0027000 24380643-24386562 long non-coding(lnc) isoforms of known genes 3348 45.16129 20
Osa01LNT0026900.1 1 Osa01LNG0026900 24390630-24391832 long non-coding(lnc) isoforms of known genes 768 41.79688 2
Osa01LNT0027100.1 1 Osa01LNG0027100 24471977-24478429 long non-coding(lnc) isoforms of known genes 2956 43.97835 11
Osa01LNT0027200.1 1 Osa01LNG0027200 24498873-24504871 long non-coding(lnc) isoforms of known genes 2268 46.51675 21
Osa01LNT0002700.1 1 Osa01LNG0002700 2459409-2462326 intergenetic lncRNA (lincRNA) 975 49.74359 2
Osa01LNT0027300.1 1 Osa01LNG0027300 24616208-24622775 long non-coding(lnc) isoforms of known genes 2406 47.29842 17
Osa01LNT0027400.1 1 Osa01LNG0027400 24633776-24639213 long non-coding(lnc) isoforms of known genes 3941 45.01396 11
Osa01LNT0027500.1 1 Osa01LNG0027500 24696141-24697792 sense lncRNA 400 42.0 4
Osa01LNT0027500.2 1 Osa01LNG0027500 24696141-24697792 sense lncRNA 397 41.8136 4
Osa01LNT0027600.1 1 Osa01LNG0027600 24753661-24758860 long non-coding(lnc) isoforms of known genes 1850 58.91892 6
Osa01LNT0027600.2 1 Osa01LNG0027600 24753661-24758860 long non-coding(lnc) isoforms of known genes 1678 59.118 3
Osa01LNT0027700.1 1 Osa01LNG0027700 24763107-24768246 long non-coding(lnc) isoforms of known genes 3074 47.7879 5
Osa01LNT0027900.1 1 Osa01LNG0027900 24813615-24815635 sense lncRNA 947 47.83527 4
Osa01LNT0027800.1 1 Osa01LNG0027800 24823998-24828139 long non-coding(lnc) isoforms of known genes 2551 45.58996 4
Osa01LNT0028000.2 1 Osa01LNG0028000 25019249-25021608 long non-coding(lnc) isoforms of known genes 2285 42.49453 2
Osa01LNT0028000.1 1 Osa01LNG0028000 25019249-25021608 sense lncRNA 722 56.23269 2
Osa01LNT0028000.3 1 Osa01LNG0028000 25019249-25021608 long non-coding(lnc) isoforms of known genes 634 55.67823 3