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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0146000.1 2 Osa02LNG0146000 2643056-2646360 long non-coding(lnc) isoforms of known genes 1546 46.24838 3
Osa02LNT0176400.1 2 Osa02LNG0176400 26476674-26481112 long non-coding(lnc) isoforms of known genes 1445 45.95156 10
Osa02LNT0176400.2 2 Osa02LNG0176400 26476674-26481112 long non-coding(lnc) isoforms of known genes 1446 45.91978 10
Osa02LNT0176500.1 2 Osa02LNG0176500 26504378-26510073 long non-coding(lnc) isoforms of known genes 2139 44.97429 14
Osa02LNT0176600.1 2 Osa02LNG0176600 26564631-26571664 long non-coding(lnc) isoforms of known genes 733 52.25102 3
Osa02LNT0176700.1 2 Osa02LNG0176700 26573548-26576645 long non-coding(lnc) isoforms of known genes 1440 53.33333 4
Osa02LNT0176800.1 2 Osa02LNG0176800 26620327-26622212 long non-coding(lnc) isoforms of known genes 610 56.06557 3
Osa02LNT0176900.2 2 Osa02LNG0176900 26625056-26632116 long non-coding(lnc) isoforms of known genes 3853 56.13807 9
Osa02LNT0176900.1 2 Osa02LNG0176900 26625056-26632116 long non-coding(lnc) isoforms of known genes 3934 55.97356 8
Osa02LNT0177000.1 2 Osa02LNG0177000 26774221-26780263 sense lncRNA 1379 60.26106 3
Osa02LNT0177100.1 2 Osa02LNG0177100 26801168-26801369 intronic lncRNA 202 30.69307 1
Osa02LNT0146100.1 2 Osa02LNG0146100 2680615-2680816 intergenetic lncRNA (lincRNA) 202 32.67327 1
Osa02LNT0177200.1 2 Osa02LNG0177200 26978745-26979137 intergenetic lncRNA (lincRNA) 393 60.30534 1
Osa02LNT0177300.1 2 Osa02LNG0177300 26982288-26986839 long non-coding(lnc) isoforms of known genes 2021 44.92825 4
Osa02LNT0177300.3 2 Osa02LNG0177300 26982288-26986839 long non-coding(lnc) isoforms of known genes 1339 54.66766 5
Osa02LNT0177300.2 2 Osa02LNG0177300 26982288-26986839 long non-coding(lnc) isoforms of known genes 2212 44.84629 4
Osa02LNT0177400.1 2 Osa02LNG0177400 27025705-27026166 Antisense lncRNA 296 43.91892 3
Osa02LNT0177500.1 2 Osa02LNG0177500 27048920-27061955 long non-coding(lnc) isoforms of known genes 4848 43.11056 11
Osa02LNT0177600.1 2 Osa02LNG0177600 27084392-27087479 long non-coding(lnc) isoforms of known genes 1169 49.44397 3
Osa02LNT0177700.1 2 Osa02LNG0177700 27112899-27113777 intergenetic lncRNA (lincRNA) 879 44.59613 1
Osa02LNT0473000.1 2 Osa02LNG0473000 2717770-2718035 intergenetic lncRNA (lincRNA) 266 27.44361 1
Osa02LNT0473100.1 2 Osa02LNG0473100 2717770-2718035 intergenetic lncRNA (lincRNA) 266 27.44361 1
Osa02LNT0177800.1 2 Osa02LNG0177800 27188149-27191911 long non-coding(lnc) isoforms of known genes 997 48.14443 4
Osa02LNT0177900.1 2 Osa02LNG0177900 27236460-27241155 long non-coding(lnc) isoforms of known genes 3524 40.52213 7
Osa02LNT0178000.1 2 Osa02LNG0178000 27241256-27242032 intergenetic lncRNA (lincRNA) 777 52.12355 1