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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0178300.1 2 Osa02LNG0178300 27273381-27279473 long non-coding(lnc) isoforms of known genes 4336 41.25923 5
Osa02LNT0178200.1 2 Osa02LNG0178200 27297098-27300008 sense lncRNA 2738 50.98612 2
Osa02LNT0178200.2 2 Osa02LNG0178200 27297098-27300008 sense lncRNA 2732 50.98829 2
Osa02LNT0178100.1 2 Osa02LNG0178100 27302071-27302874 intergenetic lncRNA (lincRNA) 726 51.79063 2
Osa02LNT0178400.2 2 Osa02LNG0178400 27330318-27338785 long non-coding(lnc) isoforms of known genes 3743 49.85306 23
Osa02LNT0178400.1 2 Osa02LNG0178400 27330318-27338785 long non-coding(lnc) isoforms of known genes 3729 49.77206 23
Osa02LNT0178500.1 2 Osa02LNG0178500 27480264-27484551 long non-coding(lnc) isoforms of known genes 2657 44.82499 4
Osa02LNT0178600.1 2 Osa02LNG0178600 27505068-27505682 intergenetic lncRNA (lincRNA) 506 59.48617 2
Osa02LNT0178700.2 2 Osa02LNG0178700 27667980-27671383 long non-coding(lnc) isoforms of known genes 2025 53.38272 4
Osa02LNT0178700.1 2 Osa02LNG0178700 27667980-27671383 long non-coding(lnc) isoforms of known genes 2380 53.78151 4
Osa02LNT0146200.1 2 Osa02LNG0146200 2768258-2768859 intronic lncRNA 602 33.22259 1
Osa02LNT0146400.1 2 Osa02LNG0146400 2772502-2774515 sense lncRNA 1819 47.93843 2
Osa02LNT0146300.1 2 Osa02LNG0146300 2773266-2774685 long non-coding(lnc) isoforms of known genes 427 64.40281 2
Osa02LNT0178800.1 2 Osa02LNG0178800 27776483-27781443 long non-coding(lnc) isoforms of known genes 2744 44.09621 8
Osa02LNT0178900.1 2 Osa02LNG0178900 28013034-28020865 long non-coding(lnc) isoforms of known genes 1392 50.71839 6
Osa02LNT0179000.1 2 Osa02LNG0179000 28014839-28015874 Antisense lncRNA 604 40.72848 2
Osa02LNT0146500.1 2 Osa02LNG0146500 2804452-2807576 long non-coding(lnc) isoforms of known genes 2056 44.94163 2
Osa02LNT0179100.1 2 Osa02LNG0179100 28108634-28113384 long non-coding(lnc) isoforms of known genes 3468 49.19262 6
Osa02LNT0179200.1 2 Osa02LNG0179200 28136347-28137459 long non-coding(lnc) isoforms of known genes 954 63.41719 3
Osa02LNT0179300.1 2 Osa02LNG0179300 28160301-28162054 long non-coding(lnc) isoforms of known genes 1433 62.66574 4
Osa02LNT0179400.1 2 Osa02LNG0179400 28175466-28180836 sense lncRNA 1744 47.76376 2
Osa02LNT0179500.1 2 Osa02LNG0179500 28293795-28308016 long non-coding(lnc) isoforms of known genes 7363 43.73217 21
Osa02LNT0179500.2 2 Osa02LNG0179500 28293795-28308016 long non-coding(lnc) isoforms of known genes 7266 43.84806 22
Osa02LNT0179600.1 2 Osa02LNG0179600 28339193-28344100 intergenetic lncRNA (lincRNA) 810 41.48148 5
Osa02LNT0179700.2 2 Osa02LNG0179700 28415143-28417062 long non-coding(lnc) isoforms of known genes 927 47.35707 5