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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0362900.1 6 Osa06LNG0362900 31184955-31197808 long non-coding(lnc) isoforms of known genes 5805 44.8062 33
Osa06LNT0511700.1 6 Osa06LNG0511700 31202878-31203131 intergenetic lncRNA (lincRNA) 254 28.74016 1
Osa06LNT0363000.1 6 Osa06LNG0363000 31217788-31226568 long non-coding(lnc) isoforms of known genes 3328 44.71154 18
Osa06LNT0363000.3 6 Osa06LNG0363000 31217788-31226568 long non-coding(lnc) isoforms of known genes 6058 39.13833 13
Osa06LNT0363000.2 6 Osa06LNG0363000 31217788-31226568 long non-coding(lnc) isoforms of known genes 2357 49.85151 18
Osa06LNT0496900.1 6 Osa06LNG0496900 3126021-3126264 intergenetic lncRNA (lincRNA) 244 24.18033 1
Osa06LNT0497000.1 6 Osa06LNG0497000 3126021-3126264 intergenetic lncRNA (lincRNA) 244 24.18033 1
Osa06LNT0497100.1 6 Osa06LNG0497100 3126331-3126604 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa06LNT0497200.1 6 Osa06LNG0497200 3126331-3126604 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa06LNT0329000.1 6 Osa06LNG0329000 3154274-3156484 long non-coding(lnc) isoforms of known genes 1436 36.90808 4
Osa06LNT0329100.1 6 Osa06LNG0329100 3162860-3169331 long non-coding(lnc) isoforms of known genes 1912 38.17992 7
Osa06LNT0329300.1 6 Osa06LNG0329300 3219086-3222938 long non-coding(lnc) isoforms of known genes 2010 44.27861 9
Osa06LNT0329200.1 6 Osa06LNG0329200 3234531-3237308 intergenetic lncRNA (lincRNA) 2438 42.6169 2
Osa06LNT0329400.1 6 Osa06LNG0329400 3285541-3286294 long non-coding(lnc) isoforms of known genes 672 51.19048 2
Osa06LNT0329600.1 6 Osa06LNG0329600 3293062-3293348 intronic lncRNA 287 68.29268 1
Osa06LNT0329700.1 6 Osa06LNG0329700 3293062-3295760 Antisense lncRNA 459 63.61656 3
Osa06LNT0329500.1 6 Osa06LNG0329500 3304636-3305242 intergenetic lncRNA (lincRNA) 508 48.8189 2
Osa06LNT0329800.1 6 Osa06LNG0329800 3319140-3322249 long non-coding(lnc) isoforms of known genes 1189 53.74264 4
Osa06LNT0329900.1 6 Osa06LNG0329900 3363911-3371061 long non-coding(lnc) isoforms of known genes 6356 44.163 9
Osa06LNT0330000.2 6 Osa06LNG0330000 3588217-3595837 long non-coding(lnc) isoforms of known genes 1926 49.22118 15
Osa06LNT0330000.1 6 Osa06LNG0330000 3588217-3595837 long non-coding(lnc) isoforms of known genes 1896 49.10338 15
Osa06LNT0330100.1 6 Osa06LNG0330100 3598466-3605181 long non-coding(lnc) isoforms of known genes 3199 46.45202 14
Osa06LNT0330200.1 6 Osa06LNG0330200 3678304-3678854 long non-coding(lnc) isoforms of known genes 469 71.64179 2
Osa06LNT0330300.1 6 Osa06LNG0330300 3795325-3798732 long non-coding(lnc) isoforms of known genes 1688 53.43602 3
Osa06LNT0324100.3 6 Osa06LNG0324100 387238-394136 long non-coding(lnc) isoforms of known genes 5097 47.91054 12
Osa06LNT0324100.1 6 Osa06LNG0324100 387238-394136 long non-coding(lnc) isoforms of known genes 5025 48.21891 13
Osa06LNT0324100.2 6 Osa06LNG0324100 387238-394136 long non-coding(lnc) isoforms of known genes 4903 48.31736 14
Osa06LNT0330400.1 6 Osa06LNG0330400 3924753-3927950 long non-coding(lnc) isoforms of known genes 2071 51.90729 9
Osa06LNT0330500.1 6 Osa06LNG0330500 3934027-3937229 long non-coding(lnc) isoforms of known genes 2747 47.25155 2
Osa06LNT0330600.2 6 Osa06LNG0330600 3956172-3961586 long non-coding(lnc) isoforms of known genes 3179 43.15823 8
Osa06LNT0330600.1 6 Osa06LNG0330600 3956172-3961586 long non-coding(lnc) isoforms of known genes 1798 46.66296 7
Osa06LNT0324200.1 6 Osa06LNG0324200 398679-403482 long non-coding(lnc) isoforms of known genes 1482 46.2888 9
Osa06LNT0330700.1 6 Osa06LNG0330700 3995572-3996571 Antisense lncRNA 670 59.40299 4
Osa06LNT0330800.1 6 Osa06LNG0330800 4062334-4063409 long non-coding(lnc) isoforms of known genes 986 71.29817 2
Osa06LNT0330900.1 6 Osa06LNG0330900 4167296-4183929 long non-coding(lnc) isoforms of known genes 4710 45.138 31
Osa06LNT0331000.1 6 Osa06LNG0331000 4345819-4353377 long non-coding(lnc) isoforms of known genes 2601 44.55978 11
Osa06LNT0331100.1 6 Osa06LNG0331100 4424387-4425761 sense lncRNA 1201 52.37302 2
Osa06LNT0331200.1 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2355 42.03822 6
Osa06LNT0331200.2 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2352 42.0068 6
Osa06LNT0331200.3 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2258 41.00974 7
Osa06LNT0331300.1 6 Osa06LNG0331300 4468376-4470901 sense lncRNA 2036 40.22593 3
Osa06LNT0331400.1 6 Osa06LNG0331400 4472394-4476671 long non-coding(lnc) isoforms of known genes 2546 44.93323 5
Osa06LNT0331600.1 6 Osa06LNG0331600 4571098-4574904 long non-coding(lnc) isoforms of known genes 2069 46.30256 6
Osa06LNT0331600.2 6 Osa06LNG0331600 4571098-4574904 long non-coding(lnc) isoforms of known genes 2034 45.91937 6
Osa06LNT0331500.1 6 Osa06LNG0331500 4587586-4590880 long non-coding(lnc) isoforms of known genes 1988 44.01408 5
Osa06LNT0331700.1 6 Osa06LNG0331700 4594428-4595688 long non-coding(lnc) isoforms of known genes 1031 40.93113 2
Osa06LNT0331900.1 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2559 48.88628 16
Osa06LNT0331900.2 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2603 48.75144 16
Osa06LNT0331900.3 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2685 48.19367 16
Osa06LNT0332000.1 6 Osa06LNG0332000 4799091-4799748 long non-coding(lnc) isoforms of known genes 573 46.9459 2