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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0028100.1 1 Osa01LNG0028100 25029829-25033240 long non-coding(lnc) isoforms of known genes 2786 42.13927 3
Osa01LNT0028200.1 1 Osa01LNG0028200 25146410-25147480 sense lncRNA 1071 54.52848 1
Osa01LNT0028300.1 1 Osa01LNG0028300 25324428-25326862 intergenetic lncRNA (lincRNA) 2435 42.21766 1
Osa01LNT0028400.1 1 Osa01LNG0028400 25391565-25392161 intergenetic lncRNA (lincRNA) 597 39.02848 1
Osa01LNT0028500.2 1 Osa01LNG0028500 25417261-25425888 long non-coding(lnc) isoforms of known genes 4939 43.89553 8
Osa01LNT0028500.1 1 Osa01LNG0028500 25417261-25425888 sense lncRNA 4865 43.94656 8
Osa01LNT0028700.1 1 Osa01LNG0028700 25520058-25523268 long non-coding(lnc) isoforms of known genes 992 49.79839 7
Osa01LNT0028800.1 1 Osa01LNG0028800 25524187-25532029 long non-coding(lnc) isoforms of known genes 3702 40.46461 24
Osa01LNT0028600.1 1 Osa01LNG0028600 25547516-25548880 intergenetic lncRNA (lincRNA) 1365 47.03297 1
Osa01LNT0002800.1 1 Osa01LNG0002800 2575517-2578000 long non-coding(lnc) isoforms of known genes 663 46.60633 4
Osa01LNT0028900.1 1 Osa01LNG0028900 25777452-25782309 long non-coding(lnc) isoforms of known genes 1482 42.30769 9
Osa01LNT0029000.1 1 Osa01LNG0029000 25836448-25843494 long non-coding(lnc) isoforms of known genes 887 58.28636 5
Osa01LNT0002900.1 1 Osa01LNG0002900 2584986-2588279 long non-coding(lnc) isoforms of known genes 2454 47.84026 8
Osa01LNT0459700.1 1 Osa01LNG0459700 25905997-25906252 intergenetic lncRNA (lincRNA) 256 29.29688 1
Osa01LNT0459600.1 1 Osa01LNG0459600 25905997-25906252 intergenetic lncRNA (lincRNA) 256 29.29688 1
Osa01LNT0029100.1 1 Osa01LNG0029100 25917636-25922976 long non-coding(lnc) isoforms of known genes 1905 50.13123 9
Osa01LNT0459800.1 1 Osa01LNG0459800 25948301-25948541 intergenetic lncRNA (lincRNA) 241 25.3112 1
Osa01LNT0029200.1 1 Osa01LNG0029200 26051800-26053799 intergenetic lncRNA (lincRNA) 688 54.94186 3
Osa01LNT0029300.1 1 Osa01LNG0029300 26060892-26071730 long non-coding(lnc) isoforms of known genes 7339 47.75855 17
Osa01LNT0029300.2 1 Osa01LNG0029300 26060892-26071730 long non-coding(lnc) isoforms of known genes 7610 47.3456 17
Osa01LNT0029300.3 1 Osa01LNG0029300 26060892-26071730 long non-coding(lnc) isoforms of known genes 2039 49.7793 15
Osa01LNT0029400.1 1 Osa01LNG0029400 26111955-26114140 long non-coding(lnc) isoforms of known genes 1143 49.78128 4
Osa01LNT0029500.1 1 Osa01LNG0029500 26246089-26248246 intergenetic lncRNA (lincRNA) 1272 50.55031 2
Osa01LNT0029600.1 1 Osa01LNG0029600 26278129-26285078 long non-coding(lnc) isoforms of known genes 5212 40.96316 12
Osa01LNT0029600.2 1 Osa01LNG0029600 26278129-26285078 long non-coding(lnc) isoforms of known genes 5220 40.9387 12