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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa02LNT0192100.1 2 Osa02LNG0192100 35713123-35713706 intergenetic lncRNA (lincRNA) 584 47.43151 1
Osa02LNT0192200.1 2 Osa02LNG0192200 35757157-35757652 intronic lncRNA 496 29.03226 1
Osa02LNT0192300.1 2 Osa02LNG0192300 35761332-35768388 long non-coding(lnc) isoforms of known genes 2878 46.10841 22
Osa02LNT0147500.1 2 Osa02LNG0147500 3580321-3581706 sense lncRNA 841 50.8918 2
Osa02LNT0192400.1 2 Osa02LNG0192400 35812639-35818178 long non-coding(lnc) isoforms of known genes 1834 48.96401 18
Osa02LNT0192500.1 2 Osa02LNG0192500 35932596-35933176 intergenetic lncRNA (lincRNA) 581 46.4716 1
Osa02LNT0147700.2 2 Osa02LNG0147700 3623786-3631539 long non-coding(lnc) isoforms of known genes 4434 44.54217 15
Osa02LNT0147700.1 2 Osa02LNG0147700 3623786-3631539 long non-coding(lnc) isoforms of known genes 3520 46.875 16
Osa02LNT0147700.3 2 Osa02LNG0147700 3623786-3631539 long non-coding(lnc) isoforms of known genes 3863 45.68988 16
Osa02LNT0147600.1 2 Osa02LNG0147600 3655262-3656228 sense lncRNA 694 50.14409 2
Osa02LNT0147800.2 2 Osa02LNG0147800 3705886-3709861 long non-coding(lnc) isoforms of known genes 1119 45.48704 10
Osa02LNT0147800.1 2 Osa02LNG0147800 3705886-3709861 long non-coding(lnc) isoforms of known genes 1091 45.46288 10
Osa02LNT0473300.1 2 Osa02LNG0473300 3742238-3742515 intergenetic lncRNA (lincRNA) 278 46.40288 1
Osa02LNT0473400.1 2 Osa02LNG0473400 3742239-3742516 intergenetic lncRNA (lincRNA) 278 46.04317 1
Osa02LNT0147900.1 2 Osa02LNG0147900 3846223-3850113 long non-coding(lnc) isoforms of known genes 1296 52.5463 3
Osa02LNT0148100.1 2 Osa02LNG0148100 3855966-3863856 long non-coding(lnc) isoforms of known genes 1933 43.5075 14
Osa02LNT0148000.1 2 Osa02LNG0148000 3925270-3926116 intergenetic lncRNA (lincRNA) 847 57.49705 1
Osa02LNT0473500.1 2 Osa02LNG0473500 3939456-3939729 intergenetic lncRNA (lincRNA) 274 29.92701 1
Osa02LNT0473600.1 2 Osa02LNG0473600 3939456-3939729 intergenetic lncRNA (lincRNA) 274 29.92701 1
Osa02LNT0148200.1 2 Osa02LNG0148200 3950459-3955968 long non-coding(lnc) isoforms of known genes 3201 47.29772 9
Osa02LNT0473700.1 2 Osa02LNG0473700 3963618-3963872 intergenetic lncRNA (lincRNA) 255 27.84314 1
Osa02LNT0148300.2 2 Osa02LNG0148300 3992137-3995037 long non-coding(lnc) isoforms of known genes 1202 50.99834 8
Osa02LNT0148300.1 2 Osa02LNG0148300 3992137-3995037 long non-coding(lnc) isoforms of known genes 1199 51.04254 8
Osa02LNT0148400.1 2 Osa02LNG0148400 4057866-4060817 long non-coding(lnc) isoforms of known genes 1996 55.51102 6
Osa02LNT0148500.3 2 Osa02LNG0148500 4165386-4175490 long non-coding(lnc) isoforms of known genes 4501 45.83426 17