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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0364500.1 7 Osa07LNG0364500 1780555-1786366 intergenetic lncRNA (lincRNA) 1621 50.03085 2
Osa07LNT0380100.1 7 Osa07LNG0380100 17881210-17887798 long non-coding(lnc) isoforms of known genes 2077 45.64275 14
Osa07LNT0380200.1 7 Osa07LNG0380200 18133138-18135622 long non-coding(lnc) isoforms of known genes 1184 49.23986 4
Osa07LNT0380300.1 7 Osa07LNG0380300 18152427-18154530 intergenetic lncRNA (lincRNA) 876 43.49315 4
Osa07LNT0529100.1 7 Osa07LNG0529100 18168745-18168945 intergenetic lncRNA (lincRNA) 201 49.25373 1
Osa07LNT0380400.1 7 Osa07LNG0380400 18253700-18258019 long non-coding(lnc) isoforms of known genes 1250 50.48 9
Osa07LNT0364600.1 7 Osa07LNG0364600 1832992-1835740 long non-coding(lnc) isoforms of known genes 1175 50.80851 10
Osa07LNT0380500.1 7 Osa07LNG0380500 18338217-18351612 long non-coding(lnc) isoforms of known genes 4216 45.5408 30
Osa07LNT0380600.1 7 Osa07LNG0380600 18466726-18471036 intergenetic lncRNA (lincRNA) 2929 40.76477 4
Osa07LNT0380700.1 7 Osa07LNG0380700 18503251-18506763 long non-coding(lnc) isoforms of known genes 1636 46.63814 8
Osa07LNT0529200.1 7 Osa07LNG0529200 18517274-18517499 intergenetic lncRNA (lincRNA) 226 26.99115 1
Osa07LNT0529300.1 7 Osa07LNG0529300 18517286-18517487 intergenetic lncRNA (lincRNA) 202 25.24752 1
Osa07LNT0380800.1 7 Osa07LNG0380800 18532547-18541191 long non-coding(lnc) isoforms of known genes 769 53.05592 3
Osa07LNT0380900.1 7 Osa07LNG0380900 18625486-18639047 long non-coding(lnc) isoforms of known genes 7194 43.63358 11
Osa07LNT0529400.1 7 Osa07LNG0529400 18760508-18760782 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa07LNT0529500.1 7 Osa07LNG0529500 18760508-18760782 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa07LNT0529600.1 7 Osa07LNG0529600 18888970-18889214 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa07LNT0529700.1 7 Osa07LNG0529700 18888970-18889214 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa07LNT0529800.1 7 Osa07LNG0529800 18889281-18889555 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa07LNT0529900.1 7 Osa07LNG0529900 18889281-18889555 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa07LNT0530000.1 7 Osa07LNG0530000 18889928-18890187 intergenetic lncRNA (lincRNA) 260 41.53846 1
Osa07LNT0530100.1 7 Osa07LNG0530100 18905388-18905665 intronic lncRNA 278 26.97842 1
Osa07LNT0530200.1 7 Osa07LNG0530200 18905388-18905665 intronic lncRNA 278 26.97842 1
Osa07LNT0530300.1 7 Osa07LNG0530300 18965492-18965698 intergenetic lncRNA (lincRNA) 207 47.82609 1
Osa07LNT0530400.1 7 Osa07LNG0530400 18965584-18965786 intergenetic lncRNA (lincRNA) 203 31.52709 1
Osa07LNT0530600.1 7 Osa07LNG0530600 19000695-19000969 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa07LNT0530500.1 7 Osa07LNG0530500 19000695-19000969 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa07LNT0381000.1 7 Osa07LNG0381000 19092421-19094013 intergenetic lncRNA (lincRNA) 501 45.30938 2
Osa07LNT0381100.1 7 Osa07LNG0381100 19252935-19257984 long non-coding(lnc) isoforms of known genes 2837 50.5816 23
Osa07LNT0381200.1 7 Osa07LNG0381200 19271812-19276174 long non-coding(lnc) isoforms of known genes 2594 53.7394 5
Osa07LNT0381300.1 7 Osa07LNG0381300 19310261-19311340 long non-coding(lnc) isoforms of known genes 535 46.72897 4
Osa07LNT0381400.1 7 Osa07LNG0381400 19378880-19386309 long non-coding(lnc) isoforms of known genes 2976 49.05914 10
Osa07LNT0381500.1 7 Osa07LNG0381500 19530211-19534631 sense lncRNA 665 52.33083 2
Osa07LNT0381600.1 7 Osa07LNG0381600 19601499-19602955 intronic lncRNA 443 61.39955 2
Osa07LNT0381700.1 7 Osa07LNG0381700 19615377-19615602 Antisense lncRNA 226 34.51327 1
Osa07LNT0381800.1 7 Osa07LNG0381800 19656083-19662778 long non-coding(lnc) isoforms of known genes 4230 48.62884 7
Osa07LNT0381900.1 7 Osa07LNG0381900 19665002-19665230 intronic lncRNA 229 37.99127 1
Osa07LNT0382000.1 7 Osa07LNG0382000 19737599-19743343 long non-coding(lnc) isoforms of known genes 3894 51.02722 9
Osa07LNT0382100.1 7 Osa07LNG0382100 19926106-19932037 long non-coding(lnc) isoforms of known genes 2660 48.38346 8
Osa07LNT0382200.1 7 Osa07LNG0382200 20087170-20093360 long non-coding(lnc) isoforms of known genes 4125 48.33939 6
Osa07LNT0382300.1 7 Osa07LNG0382300 20115611-20123058 long non-coding(lnc) isoforms of known genes 4111 49.42836 18
Osa07LNT0382400.1 7 Osa07LNG0382400 20164251-20170179 long non-coding(lnc) isoforms of known genes 4764 44.62636 2
Osa07LNT0382500.1 7 Osa07LNG0382500 20277401-20279936 long non-coding(lnc) isoforms of known genes 1661 59.96388 5
Osa07LNT0364800.1 7 Osa07LNG0364800 2029189-2031917 sense lncRNA 508 42.32283 3
Osa07LNT0530700.1 7 Osa07LNG0530700 20498613-20498896 intergenetic lncRNA (lincRNA) 284 27.46479 1
Osa07LNT0530800.1 7 Osa07LNG0530800 20498613-20498896 intergenetic lncRNA (lincRNA) 284 27.46479 1
Osa07LNT0382600.1 7 Osa07LNG0382600 20500413-20501307 intergenetic lncRNA (lincRNA) 895 63.01676 1
Osa07LNT0530900.1 7 Osa07LNG0530900 20536971-20537201 intergenetic lncRNA (lincRNA) 231 32.03463 1
Osa07LNT0531000.1 7 Osa07LNG0531000 20660892-20661164 intergenetic lncRNA (lincRNA) 273 31.86813 1
Osa07LNT0531100.1 7 Osa07LNG0531100 20660892-20661164 intergenetic lncRNA (lincRNA) 273 31.86813 1