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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0392500.1 7 Osa07LNG0392500 27929713-27933923 long non-coding(lnc) isoforms of known genes 1519 50.23041 2
Osa07LNT0392600.1 7 Osa07LNG0392600 27950941-27957461 long non-coding(lnc) isoforms of known genes 1775 46.70423 13
Osa07LNT0366400.1 7 Osa07LNG0366400 2795894-2796442 intronic lncRNA 447 32.21477 2
Osa07LNT0392700.1 7 Osa07LNG0392700 27975416-27976660 intergenetic lncRNA (lincRNA) 1245 36.14458 1
Osa07LNT0392800.1 7 Osa07LNG0392800 27983248-27988165 long non-coding(lnc) isoforms of known genes 2230 46.59193 10
Osa07LNT0392800.2 7 Osa07LNG0392800 27983248-27988165 long non-coding(lnc) isoforms of known genes 2160 46.94444 11
Osa07LNT0366200.1 7 Osa07LNG0366200 2801625-2804332 long non-coding(lnc) isoforms of known genes 1215 54.97942 2
Osa07LNT0392900.1 7 Osa07LNG0392900 28140979-28143782 long non-coding(lnc) isoforms of known genes 1059 44.94806 5
Osa07LNT0393000.1 7 Osa07LNG0393000 28146509-28149601 long non-coding(lnc) isoforms of known genes 1276 50.94044 3
Osa07LNT0366300.1 7 Osa07LNG0366300 2819056-2823109 long non-coding(lnc) isoforms of known genes 1515 48.77888 5
Osa07LNT0393100.1 7 Osa07LNG0393100 28238948-28239547 intergenetic lncRNA (lincRNA) 600 57.66667 1
Osa07LNT0393200.3 7 Osa07LNG0393200 28391722-28400306 long non-coding(lnc) isoforms of known genes 3494 45.07728 6
Osa07LNT0393200.1 7 Osa07LNG0393200 28391722-28400306 long non-coding(lnc) isoforms of known genes 3386 44.86119 5
Osa07LNT0393200.2 7 Osa07LNG0393200 28391722-28400306 long non-coding(lnc) isoforms of known genes 5476 41.96494 5
Osa07LNT0393300.1 7 Osa07LNG0393300 28469782-28474153 long non-coding(lnc) isoforms of known genes 1842 47.82845 15
Osa07LNT0393400.2 7 Osa07LNG0393400 28584875-28593347 long non-coding(lnc) isoforms of known genes 1875 45.01333 10
Osa07LNT0393400.1 7 Osa07LNG0393400 28584875-28593347 long non-coding(lnc) isoforms of known genes 1694 45.27745 10
Osa07LNT0393500.1 7 Osa07LNG0393500 28631211-28638569 long non-coding(lnc) isoforms of known genes 1934 46.6908 12
Osa07LNT0393500.3 7 Osa07LNG0393500 28631211-28638569 long non-coding(lnc) isoforms of known genes 2017 46.7526 13
Osa07LNT0393500.2 7 Osa07LNG0393500 28631211-28638569 long non-coding(lnc) isoforms of known genes 2374 45.07161 11
Osa07LNT0393500.4 7 Osa07LNG0393500 28631211-28638569 long non-coding(lnc) isoforms of known genes 2398 45.20434 11
Osa07LNT0393600.1 7 Osa07LNG0393600 28734807-28738454 intergenetic lncRNA (lincRNA) 1616 45.97772 4
Osa07LNT0393700.1 7 Osa07LNG0393700 28741888-28745900 long non-coding(lnc) isoforms of known genes 2705 57.07948 10
Osa07LNT0393800.1 7 Osa07LNG0393800 28786471-28793002 long non-coding(lnc) isoforms of known genes 3470 49.39481 11
Osa07LNT0366500.1 7 Osa07LNG0366500 2882846-2892741 long non-coding(lnc) isoforms of known genes 4757 47.31974 30
Osa07LNT0393900.1 7 Osa07LNG0393900 28832616-28844860 long non-coding(lnc) isoforms of known genes 5782 44.3964 19
Osa07LNT0393900.3 7 Osa07LNG0393900 28832616-28844860 long non-coding(lnc) isoforms of known genes 7129 42.46037 17
Osa07LNT0393900.2 7 Osa07LNG0393900 28832616-28844860 long non-coding(lnc) isoforms of known genes 5975 44.31799 19
Osa07LNT0394000.1 7 Osa07LNG0394000 28855815-28857268 Antisense lncRNA 273 59.34066 2
Osa07LNT0394100.1 7 Osa07LNG0394100 29029656-29031020 long non-coding(lnc) isoforms of known genes 1268 52.05047 2
Osa07LNT0394200.1 7 Osa07LNG0394200 29077209-29081165 long non-coding(lnc) isoforms of known genes 1936 48.34711 3
Osa07LNT0394300.1 7 Osa07LNG0394300 29112296-29120708 sense lncRNA 1565 44.15335 2
Osa07LNT0394400.1 7 Osa07LNG0394400 29247849-29251961 long non-coding(lnc) isoforms of known genes 2430 48.39506 11
Osa07LNT0394500.1 7 Osa07LNG0394500 29342848-29348450 long non-coding(lnc) isoforms of known genes 4339 44.27287 6
Osa07LNT0394600.1 7 Osa07LNG0394600 29353061-29357302 long non-coding(lnc) isoforms of known genes 2963 50.52312 3
Osa07LNT0394700.1 7 Osa07LNG0394700 29512230-29516331 long non-coding(lnc) isoforms of known genes 2155 59.9536 3
Osa07LNT0394900.1 7 Osa07LNG0394900 29666450-29682768 long non-coding(lnc) isoforms of known genes 2501 38.66453 8
Osa07LNT0394900.3 7 Osa07LNG0394900 29666450-29682768 long non-coding(lnc) isoforms of known genes 1482 43.25236 7
Osa07LNT0394900.2 7 Osa07LNG0394900 29666450-29682768 long non-coding(lnc) isoforms of known genes 1562 43.14981 6
Osa07LNT0366600.1 7 Osa07LNG0366600 3122638-3124597 long non-coding(lnc) isoforms of known genes 1509 55.53347 3
Osa07LNT0366700.3 7 Osa07LNG0366700 3153597-3157207 long non-coding(lnc) isoforms of known genes 2050 47.7561 6
Osa07LNT0366700.2 7 Osa07LNG0366700 3153597-3157207 long non-coding(lnc) isoforms of known genes 2223 46.15385 6
Osa07LNT0366700.1 7 Osa07LNG0366700 3153597-3157207 long non-coding(lnc) isoforms of known genes 2312 45.84775 6
Osa07LNT0366800.1 7 Osa07LNG0366800 3168032-3170244 long non-coding(lnc) isoforms of known genes 1175 40.85106 2
Osa07LNT0366900.1 7 Osa07LNG0366900 3270410-3275905 long non-coding(lnc) isoforms of known genes 2563 46.11783 9
Osa07LNT0367000.2 7 Osa07LNG0367000 3363008-3369891 long non-coding(lnc) isoforms of known genes 2065 47.2155 18
Osa07LNT0367000.1 7 Osa07LNG0367000 3363008-3369891 long non-coding(lnc) isoforms of known genes 2072 47.15251 18
Osa07LNT0367100.1 7 Osa07LNG0367100 3429464-3434780 long non-coding(lnc) isoforms of known genes 3310 46.52568 9
Osa07LNT0367200.1 7 Osa07LNG0367200 3471834-3478877 long non-coding(lnc) isoforms of known genes 4489 48.38494 10
Osa07LNT0367300.1 7 Osa07LNG0367300 3491992-3499214 long non-coding(lnc) isoforms of known genes 4275 45.30994 12