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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0048900.1 1 Osa01LNG0048900 38437193-38440464 long non-coding(lnc) isoforms of known genes 1295 57.14286 7
Osa01LNT0049000.1 1 Osa01LNG0049000 38491273-38494120 long non-coding(lnc) isoforms of known genes 2043 46.20656 2
Osa01LNT0049100.1 1 Osa01LNG0049100 38517646-38520243 long non-coding(lnc) isoforms of known genes 2326 45.5718 2
Osa01LNT0049200.1 1 Osa01LNG0049200 38566225-38570801 long non-coding(lnc) isoforms of known genes 1157 53.15471 5
Osa01LNT0005000.2 1 Osa01LNG0005000 3858613-3874318 long non-coding(lnc) isoforms of known genes 1318 43.85432 6
Osa01LNT0005000.1 1 Osa01LNG0005000 3858613-3874318 long non-coding(lnc) isoforms of known genes 2103 48.40704 13
Osa01LNT0462000.1 1 Osa01LNG0462000 38596209-38596477 intergenetic lncRNA (lincRNA) 269 24.90706 1
Osa01LNT0462100.1 1 Osa01LNG0462100 38596209-38596477 intergenetic lncRNA (lincRNA) 269 24.90706 1
Osa01LNT0049400.1 1 Osa01LNG0049400 38632744-38633545 long non-coding(lnc) isoforms of known genes 702 37.46439 2
Osa01LNT0049300.2 1 Osa01LNG0049300 38659397-38663607 long non-coding(lnc) isoforms of known genes 3393 40.76039 9
Osa01LNT0049300.1 1 Osa01LNG0049300 38659397-38663607 long non-coding(lnc) isoforms of known genes 3421 40.77755 9
Osa01LNT0049500.1 1 Osa01LNG0049500 38684636-38688097 long non-coding(lnc) isoforms of known genes 1862 48.97959 3
Osa01LNT0005100.1 1 Osa01LNG0005100 3880006-3880948 long non-coding(lnc) isoforms of known genes 473 44.8203 2
Osa01LNT0049600.2 1 Osa01LNG0049600 38800613-38804004 intergenetic lncRNA (lincRNA) 1681 49.07793 12
Osa01LNT0049600.1 1 Osa01LNG0049600 38800613-38804004 intergenetic lncRNA (lincRNA) 1669 49.0713 12
Osa01LNT0049700.1 1 Osa01LNG0049700 38885152-38887709 long non-coding(lnc) isoforms of known genes 1460 56.09589 3
Osa01LNT0049800.1 1 Osa01LNG0049800 38900613-38902710 long non-coding(lnc) isoforms of known genes 1028 46.88716 7
Osa01LNT0049900.1 1 Osa01LNG0049900 38930465-38934752 long non-coding(lnc) isoforms of known genes 1698 46.11307 14
Osa01LNT0050000.1 1 Osa01LNG0050000 38991071-38993773 long non-coding(lnc) isoforms of known genes 1252 51.27796 8
Osa01LNT0050100.1 1 Osa01LNG0050100 38994476-38997687 long non-coding(lnc) isoforms of known genes 1819 46.01429 8
Osa01LNT0050300.1 1 Osa01LNG0050300 39013826-39016931 sense lncRNA 2336 55.17979 4
Osa01LNT0050200.1 1 Osa01LNG0050200 39017626-39018059 intergenetic lncRNA (lincRNA) 434 54.37788 1
Osa01LNT0050400.2 1 Osa01LNG0050400 39102277-39105351 long non-coding(lnc) isoforms of known genes 1909 50.18334 6
Osa01LNT0050400.1 1 Osa01LNG0050400 39102277-39105351 long non-coding(lnc) isoforms of known genes 1919 50.13028 6
Osa01LNT0050500.1 1 Osa01LNG0050500 39129784-39134767 long non-coding(lnc) isoforms of known genes 3592 39.42094 12
Osa01LNT0050600.1 1 Osa01LNG0050600 39216719-39218757 long non-coding(lnc) isoforms of known genes 733 50.20464 6
Osa01LNT0050700.1 1 Osa01LNG0050700 39238851-39243943 long non-coding(lnc) isoforms of known genes 2655 43.76648 7
Osa01LNT0050800.1 1 Osa01LNG0050800 39270573-39274992 long non-coding(lnc) isoforms of known genes 2225 53.79775 12
Osa01LNT0050900.1 1 Osa01LNG0050900 39357593-39362775 long non-coding(lnc) isoforms of known genes 1712 47.60514 12
Osa01LNT0454600.1 1 Osa01LNG0454600 3935958-3936194 intergenetic lncRNA (lincRNA) 237 27.00422 1
Osa01LNT0051000.1 1 Osa01LNG0051000 39374936-39379545 long non-coding(lnc) isoforms of known genes 2774 46.53929 8
Osa01LNT0051100.1 1 Osa01LNG0051100 39397410-39399659 intergenetic lncRNA (lincRNA) 1357 44.50995 2
Osa01LNT0051200.1 1 Osa01LNG0051200 39437968-39442864 long non-coding(lnc) isoforms of known genes 1954 45.90583 14
Osa01LNT0051300.1 1 Osa01LNG0051300 39449696-39458379 long non-coding(lnc) isoforms of known genes 2985 47.26968 24
Osa01LNT0051400.2 1 Osa01LNG0051400 39467660-39473818 long non-coding(lnc) isoforms of known genes 2862 45.00349 11
Osa01LNT0051400.1 1 Osa01LNG0051400 39467660-39473818 long non-coding(lnc) isoforms of known genes 2932 44.78172 10
Osa01LNT0051500.1 1 Osa01LNG0051500 39516771-39517928 intergenetic lncRNA (lincRNA) 1158 65.19862 1
Osa01LNT0051600.1 1 Osa01LNG0051600 39538151-39541096 long non-coding(lnc) isoforms of known genes 1314 46.95586 9
Osa01LNT0051700.1 1 Osa01LNG0051700 39565715-39570159 long non-coding(lnc) isoforms of known genes 2325 51.22581 11
Osa01LNT0051800.1 1 Osa01LNG0051800 39616243-39633823 long non-coding(lnc) isoforms of known genes 1399 43.24518 10
Osa01LNT0051900.2 1 Osa01LNG0051900 39654634-39658051 long non-coding(lnc) isoforms of known genes 936 49.03846 4
Osa01LNT0051900.1 1 Osa01LNG0051900 39654634-39658051 long non-coding(lnc) isoforms of known genes 2208 40.57971 3
Osa01LNT0052000.1 1 Osa01LNG0052000 39684691-39690738 long non-coding(lnc) isoforms of known genes 3582 45.36572 10
Osa01LNT0052100.1 1 Osa01LNG0052100 39703410-39708221 long non-coding(lnc) isoforms of known genes 2295 46.27451 18
Osa01LNT0052200.1 1 Osa01LNG0052200 39737140-39741758 long non-coding(lnc) isoforms of known genes 1644 47.14112 13
Osa01LNT0052300.1 1 Osa01LNG0052300 39879458-39890856 long non-coding(lnc) isoforms of known genes 5113 44.76824 29
Osa01LNT0052400.1 1 Osa01LNG0052400 39881693-39882635 long non-coding(lnc) isoforms of known genes 736 43.34239 3
Osa01LNT0052500.1 1 Osa01LNG0052500 39913343-39916470 long non-coding(lnc) isoforms of known genes 1106 52.44123 8
Osa01LNT0052800.1 1 Osa01LNG0052800 39960257-39975893 long non-coding(lnc) isoforms of known genes 5724 43.90287 34
Osa01LNT0052600.1 1 Osa01LNG0052600 39990702-39999062 long non-coding(lnc) isoforms of known genes 818 57.57946 3