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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0214500.1 3 Osa03LNG0214500 13164585-13168320 long non-coding(lnc) isoforms of known genes 1515 49.24092 6
Osa03LNT0214600.1 3 Osa03LNG0214600 13168389-13169351 intergenetic lncRNA (lincRNA) 843 51.4828 2
Osa03LNT0214700.1 3 Osa03LNG0214700 13222651-13225466 long non-coding(lnc) isoforms of known genes 1943 50.64334 7
Osa03LNT0214800.1 3 Osa03LNG0214800 13575062-13577311 sense lncRNA 1757 58.22425 2
Osa03LNT0214900.1 3 Osa03LNG0214900 13608690-13612216 sense lncRNA 1865 51.58177 10
Osa03LNT0215100.1 3 Osa03LNG0215100 13727309-13738946 long non-coding(lnc) isoforms of known genes 3396 48.20377 22
Osa03LNT0215000.1 3 Osa03LNG0215000 13743580-13748142 long non-coding(lnc) isoforms of known genes 2009 46.98855 4
Osa03LNT0215200.1 3 Osa03LNG0215200 13807798-13808670 intergenetic lncRNA (lincRNA) 873 48.22451 1
Osa03LNT0215300.1 3 Osa03LNG0215300 13841106-13860857 long non-coding(lnc) isoforms of known genes 5277 45.99204 12
Osa03LNT0215400.1 3 Osa03LNG0215400 13941461-13948782 long non-coding(lnc) isoforms of known genes 1997 46.11918 19
Osa03LNT0194600.1 3 Osa03LNG0194600 1415086-1416587 intergenetic lncRNA (lincRNA) 920 42.17391 4
Osa03LNT0215500.1 3 Osa03LNG0215500 14153895-14158751 long non-coding(lnc) isoforms of known genes 1486 44.68371 17
Osa03LNT0215600.1 3 Osa03LNG0215600 14188272-14192414 long non-coding(lnc) isoforms of known genes 1821 40.9665 7
Osa03LNT0215700.2 3 Osa03LNG0215700 14213209-14220638 long non-coding(lnc) isoforms of known genes 2135 46.65105 13
Osa03LNT0215700.1 3 Osa03LNG0215700 14213209-14220638 long non-coding(lnc) isoforms of known genes 2119 46.76734 13
Osa03LNT0192900.1 3 Osa03LNG0192900 143838-144403 long non-coding(lnc) isoforms of known genes 463 55.07559 2
Osa03LNT0215800.3 3 Osa03LNG0215800 14556071-14562778 Antisense lncRNA 623 57.94543 4
Osa03LNT0215800.2 3 Osa03LNG0215800 14556071-14562778 Antisense lncRNA 964 50.3112 3
Osa03LNT0215800.1 3 Osa03LNG0215800 14556071-14562778 Antisense lncRNA 631 57.84469 4
Osa03LNT0216000.2 3 Osa03LNG0216000 14751379-14754898 long non-coding(lnc) isoforms of known genes 1783 43.63432 5
Osa03LNT0216000.1 3 Osa03LNG0216000 14751379-14754898 long non-coding(lnc) isoforms of known genes 1329 46.87735 7
Osa03LNT0215900.1 3 Osa03LNG0215900 14762732-14763333 intronic lncRNA 602 27.24252 1
Osa03LNT0216200.1 3 Osa03LNG0216200 14850286-14853783 long non-coding(lnc) isoforms of known genes 1857 46.74206 11
Osa03LNT0216100.1 3 Osa03LNG0216100 14854292-14854567 intergenetic lncRNA (lincRNA) 276 76.44928 1
Osa03LNT0216300.1 3 Osa03LNG0216300 14925199-14930386 long non-coding(lnc) isoforms of known genes 3304 53.35956 9