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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0363700.1 7 Osa07LNG0363700 559367-563229 long non-coding(lnc) isoforms of known genes 2529 46.2238 3
Osa07LNT0370700.1 7 Osa07LNG0370700 5613844-5622059 long non-coding(lnc) isoforms of known genes 824 40.1699 7
Osa07LNT0370800.1 7 Osa07LNG0370800 5691967-5699667 long non-coding(lnc) isoforms of known genes 2480 45.52419 13
Osa07LNT0370800.3 7 Osa07LNG0370800 5691967-5699667 long non-coding(lnc) isoforms of known genes 2451 45.61404 13
Osa07LNT0370800.2 7 Osa07LNG0370800 5691967-5699667 long non-coding(lnc) isoforms of known genes 2631 45.41999 13
Osa07LNT0370900.1 7 Osa07LNG0370900 5725201-5726591 long non-coding(lnc) isoforms of known genes 670 56.1194 2
Osa07LNT0371000.1 7 Osa07LNG0371000 5750998-5756651 long non-coding(lnc) isoforms of known genes 2399 42.93456 13
Osa07LNT0371100.1 7 Osa07LNG0371100 5912084-5912982 intergenetic lncRNA (lincRNA) 899 40.3782 1
Osa07LNT0371200.1 7 Osa07LNG0371200 5973604-5975170 Antisense lncRNA 543 41.98895 2
Osa07LNT0371300.1 7 Osa07LNG0371300 5976303-5979221 sense lncRNA 2179 44.79119 3
Osa07LNT0371400.1 7 Osa07LNG0371400 6222307-6231396 long non-coding(lnc) isoforms of known genes 3507 43.85515 13
Osa07LNT0371500.1 7 Osa07LNG0371500 6234898-6236824 long non-coding(lnc) isoforms of known genes 958 47.49478 2
Osa07LNT0523900.1 7 Osa07LNG0523900 6318562-6318827 intergenetic lncRNA (lincRNA) 266 26.31579 1
Osa07LNT0524000.1 7 Osa07LNG0524000 6318562-6318827 intergenetic lncRNA (lincRNA) 266 26.31579 1
Osa07LNT0371600.1 7 Osa07LNG0371600 6641627-6642146 intergenetic lncRNA (lincRNA) 413 63.92252 2
Osa07LNT0524100.1 7 Osa07LNG0524100 6660171-6660438 intergenetic lncRNA (lincRNA) 268 26.86567 1
Osa07LNT0524200.1 7 Osa07LNG0524200 6660171-6660438 intergenetic lncRNA (lincRNA) 268 26.86567 1
Osa07LNT0371700.1 7 Osa07LNG0371700 6661051-6663308 long non-coding(lnc) isoforms of known genes 1926 43.40602 3
Osa07LNT0363100.1 7 Osa07LNG0363100 66653-67766 long non-coding(lnc) isoforms of known genes 801 46.69164 3
Osa07LNT0524300.1 7 Osa07LNG0524300 6683346-6683627 intergenetic lncRNA (lincRNA) 282 42.55319 1
Osa07LNT0524500.1 7 Osa07LNG0524500 6684180-6684424 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa07LNT0524400.1 7 Osa07LNG0524400 6684180-6684424 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa07LNT0371800.1 7 Osa07LNG0371800 6695014-6698622 long non-coding(lnc) isoforms of known genes 1246 47.43178 7
Osa07LNT0521500.1 7 Osa07LNG0521500 6729-6931 intergenetic lncRNA (lincRNA) 203 35.46798 1
Osa07LNT0371900.1 7 Osa07LNG0371900 6913788-6914852 intergenetic lncRNA (lincRNA) 1065 45.16432 1
Osa07LNT0524600.1 7 Osa07LNG0524600 6967016-6967272 intergenetic lncRNA (lincRNA) 257 28.01556 1
Osa07LNT0524700.1 7 Osa07LNG0524700 7028892-7029144 intergenetic lncRNA (lincRNA) 253 28.85375 1
Osa07LNT0524800.1 7 Osa07LNG0524800 7042759-7042974 intergenetic lncRNA (lincRNA) 216 41.66667 1
Osa07LNT0372000.1 7 Osa07LNG0372000 7152849-7155428 long non-coding(lnc) isoforms of known genes 2212 38.20072 3
Osa07LNT0372100.1 7 Osa07LNG0372100 7152961-7158025 long non-coding(lnc) isoforms of known genes 2324 47.97762 10
Osa07LNT0372100.2 7 Osa07LNG0372100 7152961-7158025 long non-coding(lnc) isoforms of known genes 1906 49.79014 11
Osa07LNT0372300.2 7 Osa07LNG0372300 7160704-7167725 long non-coding(lnc) isoforms of known genes 1168 53.51027 6
Osa07LNT0372300.1 7 Osa07LNG0372300 7160704-7167725 long non-coding(lnc) isoforms of known genes 1847 57.33622 4
Osa07LNT0372200.1 7 Osa07LNG0372200 7184023-7186977 sense lncRNA 1701 54.96767 3
Osa07LNT0372400.1 7 Osa07LNG0372400 7237174-7255641 intergenetic lncRNA (lincRNA) 862 47.67981 4
Osa07LNT0524900.1 7 Osa07LNG0524900 7344626-7344920 intergenetic lncRNA (lincRNA) 295 26.77966 1
Osa07LNT0525000.1 7 Osa07LNG0525000 7344626-7344920 intergenetic lncRNA (lincRNA) 295 26.77966 1
Osa07LNT0525100.1 7 Osa07LNG0525100 7541503-7541733 intergenetic lncRNA (lincRNA) 231 32.90043 1
Osa07LNT0525200.1 7 Osa07LNG0525200 7583952-7584225 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa07LNT0525300.1 7 Osa07LNG0525300 7599263-7599500 intergenetic lncRNA (lincRNA) 238 28.15126 1
Osa07LNT0525400.1 7 Osa07LNG0525400 7599263-7599500 intergenetic lncRNA (lincRNA) 238 28.15126 1
Osa07LNT0525600.1 7 Osa07LNG0525600 7599568-7599842 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa07LNT0525500.1 7 Osa07LNG0525500 7599568-7599842 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa07LNT0372500.1 7 Osa07LNG0372500 7604107-7606268 sense lncRNA 1852 55.93952 2
Osa07LNT0372700.1 7 Osa07LNG0372700 7627351-7638692 long non-coding(lnc) isoforms of known genes 1046 42.06501 4
Osa07LNT0372700.2 7 Osa07LNG0372700 7627351-7638692 long non-coding(lnc) isoforms of known genes 912 48.35526 4
Osa07LNT0372700.3 7 Osa07LNG0372700 7627351-7638692 long non-coding(lnc) isoforms of known genes 1170 41.79487 5
Osa07LNT0372600.1 7 Osa07LNG0372600 7708696-7711319 Antisense lncRNA 376 50.26596 2
Osa07LNT0521600.1 7 Osa07LNG0521600 790702-790946 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa07LNT0372800.1 7 Osa07LNG0372800 7983125-7989263 long non-coding(lnc) isoforms of known genes 2048 45.75195 17