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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0216400.1 3 Osa03LNG0216400 15131859-15132882 intergenetic lncRNA (lincRNA) 1024 59.76562 1
Osa03LNT0465700.1 3 Osa03LNG0465700 15133390-15133663 intergenetic lncRNA (lincRNA) 274 26.64234 1
Osa03LNT0465800.1 3 Osa03LNG0465800 15133390-15133663 intergenetic lncRNA (lincRNA) 274 26.64234 1
Osa03LNT0194800.2 3 Osa03LNG0194800 1515167-1518909 long non-coding(lnc) isoforms of known genes 1429 44.29671 14
Osa03LNT0194800.1 3 Osa03LNG0194800 1515167-1518909 long non-coding(lnc) isoforms of known genes 1351 44.55959 14
Osa03LNT0466000.1 3 Osa03LNG0466000 15159219-15159493 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa03LNT0465900.1 3 Osa03LNG0465900 15159219-15159493 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa03LNT0216500.1 3 Osa03LNG0216500 15214303-15219070 long non-coding(lnc) isoforms of known genes 2838 47.35729 7
Osa03LNT0194700.1 3 Osa03LNG0194700 1525222-1527076 long non-coding(lnc) isoforms of known genes 555 46.30631 3
Osa03LNT0466100.1 3 Osa03LNG0466100 15288587-15288830 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa03LNT0466200.1 3 Osa03LNG0466200 15288587-15288830 intergenetic lncRNA (lincRNA) 244 25.81967 1
Osa03LNT0466300.1 3 Osa03LNG0466300 15288897-15289172 intergenetic lncRNA (lincRNA) 276 24.63768 1
Osa03LNT0466400.1 3 Osa03LNG0466400 15288897-15289172 intergenetic lncRNA (lincRNA) 276 24.63768 1
Osa03LNT0216600.1 3 Osa03LNG0216600 15453264-15457559 long non-coding(lnc) isoforms of known genes 1708 47.01405 3
Osa03LNT0216700.1 3 Osa03LNG0216700 15479890-15481667 long non-coding(lnc) isoforms of known genes 1516 38.91821 2
Osa03LNT0216800.1 3 Osa03LNG0216800 15658869-15661383 long non-coding(lnc) isoforms of known genes 1402 51.42653 7
Osa03LNT0194900.1 3 Osa03LNG0194900 1567984-1575496 long non-coding(lnc) isoforms of known genes 2480 46.89516 20
Osa03LNT0216900.1 3 Osa03LNG0216900 15685589-15689226 long non-coding(lnc) isoforms of known genes 2695 49.12801 4
Osa03LNT0217000.1 3 Osa03LNG0217000 15752795-15756106 sense lncRNA 1813 59.95587 2
Osa03LNT0195100.1 3 Osa03LNG0195100 1582178-1596130 long non-coding(lnc) isoforms of known genes 5457 40.55342 33
Osa03LNT0217100.1 3 Osa03LNG0217100 15967010-15969934 long non-coding(lnc) isoforms of known genes 794 36.27204 3
Osa03LNT0217200.2 3 Osa03LNG0217200 15968994-15970303 sense lncRNA 1094 62.88848 3
Osa03LNT0217200.1 3 Osa03LNG0217200 15968994-15970303 sense lncRNA 1204 61.37874 2
Osa03LNT0217300.2 3 Osa03LNG0217300 15969985-15970549 Antisense lncRNA 288 43.05556 3
Osa03LNT0217300.1 3 Osa03LNG0217300 15969985-15970549 Antisense lncRNA 481 39.29314 2