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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0467000.1 3 Osa03LNG0467000 17323102-17323375 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa03LNT0467100.1 3 Osa03LNG0467100 17323102-17323375 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa03LNT0195400.2 3 Osa03LNG0195400 1737377-1748477 long non-coding(lnc) isoforms of known genes 2891 43.54895 6
Osa03LNT0195400.1 3 Osa03LNG0195400 1737377-1748477 long non-coding(lnc) isoforms of known genes 4099 57.77019 12
Osa03LNT0218800.1 3 Osa03LNG0218800 17410000-17412951 long non-coding(lnc) isoforms of known genes 1610 49.37888 3
Osa03LNT0218800.2 3 Osa03LNG0218800 17410000-17412951 long non-coding(lnc) isoforms of known genes 1167 56.81234 4
Osa03LNT0218900.1 3 Osa03LNG0218900 17515060-17521880 long non-coding(lnc) isoforms of known genes 2778 41.07271 9
Osa03LNT0219000.3 3 Osa03LNG0219000 17616255-17622330 sense lncRNA 1644 53.71046 7
Osa03LNT0219000.2 3 Osa03LNG0219000 17616255-17622330 sense lncRNA 1515 50.62706 7
Osa03LNT0219000.1 3 Osa03LNG0219000 17616255-17622330 sense lncRNA 1684 53.56295 7
Osa03LNT0219100.1 3 Osa03LNG0219100 17719246-17723059 long non-coding(lnc) isoforms of known genes 3149 41.72753 3
Osa03LNT0219200.1 3 Osa03LNG0219200 17745407-17748460 long non-coding(lnc) isoforms of known genes 1604 48.69077 8
Osa03LNT0195500.1 3 Osa03LNG0195500 1776356-1780897 long non-coding(lnc) isoforms of known genes 3984 49.42269 4
Osa03LNT0219300.1 3 Osa03LNG0219300 17809791-17810736 sense lncRNA 876 60.04566 2
Osa03LNT0219400.1 3 Osa03LNG0219400 17850708-17853697 long non-coding(lnc) isoforms of known genes 1257 49.88067 2
Osa03LNT0219500.1 3 Osa03LNG0219500 17873187-17878013 intergenetic lncRNA (lincRNA) 2093 45.8194 3
Osa03LNT0219600.2 3 Osa03LNG0219600 17902702-17912534 long non-coding(lnc) isoforms of known genes 2180 38.66972 6
Osa03LNT0219600.1 3 Osa03LNG0219600 17902702-17912534 long non-coding(lnc) isoforms of known genes 2184 39.01099 6
Osa03LNT0219800.1 3 Osa03LNG0219800 18087305-18093804 long non-coding(lnc) isoforms of known genes 1907 45.09701 10
Osa03LNT0219800.2 3 Osa03LNG0219800 18087305-18093804 long non-coding(lnc) isoforms of known genes 1803 45.92346 11
Osa03LNT0219700.1 3 Osa03LNG0219700 18110451-18112570 long non-coding(lnc) isoforms of known genes 1499 48.29887 4
Osa03LNT0220100.1 3 Osa03LNG0220100 18125838-18126114 intergenetic lncRNA (lincRNA) 277 28.88087 1
Osa03LNT0220200.1 3 Osa03LNG0220200 18125838-18126114 intergenetic lncRNA (lincRNA) 277 28.88087 1
Osa03LNT0219900.1 3 Osa03LNG0219900 18153163-18159070 long non-coding(lnc) isoforms of known genes 2696 47.29228 17
Osa03LNT0220000.1 3 Osa03LNG0220000 18169349-18171765 sense lncRNA 1653 49.1833 5