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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0224300.1 3 Osa03LNG0224300 23093191-23096385 long non-coding(lnc) isoforms of known genes 1137 50.65963 4
Osa03LNT0469000.1 3 Osa03LNG0469000 23156394-23156650 intergenetic lncRNA (lincRNA) 257 27.23735 1
Osa03LNT0224400.2 3 Osa03LNG0224400 23369001-23384101 long non-coding(lnc) isoforms of known genes 4710 42.99363 29
Osa03LNT0224400.1 3 Osa03LNG0224400 23369001-23384101 long non-coding(lnc) isoforms of known genes 4347 43.45526 29
Osa03LNT0469100.1 3 Osa03LNG0469100 23422543-23422759 intergenetic lncRNA (lincRNA) 217 37.32719 1
Osa03LNT0224500.1 3 Osa03LNG0224500 23542029-23543025 intergenetic lncRNA (lincRNA) 997 40.52156 1
Osa03LNT0224600.1 3 Osa03LNG0224600 23582094-23584121 intronic lncRNA 2028 45.46351 1
Osa03LNT0224700.2 3 Osa03LNG0224700 23623526-23630664 long non-coding(lnc) isoforms of known genes 3897 40.59533 4
Osa03LNT0224700.1 3 Osa03LNG0224700 23623526-23630664 long non-coding(lnc) isoforms of known genes 6833 39.99707 4
Osa03LNT0224800.1 3 Osa03LNG0224800 23633296-23640082 long non-coding(lnc) isoforms of known genes 690 55.7971 5
Osa03LNT0224900.1 3 Osa03LNG0224900 23789143-23793060 intergenetic lncRNA (lincRNA) 1902 43.42797 4
Osa03LNT0225000.1 3 Osa03LNG0225000 23797039-23808239 long non-coding(lnc) isoforms of known genes 3329 43.28627 24
Osa03LNT0225000.2 3 Osa03LNG0225000 23797039-23808239 long non-coding(lnc) isoforms of known genes 2895 44.42142 25
Osa03LNT0196300.1 3 Osa03LNG0196300 2380025-2384728 long non-coding(lnc) isoforms of known genes 2509 42.92547 11
Osa03LNT0196300.2 3 Osa03LNG0196300 2380025-2384728 long non-coding(lnc) isoforms of known genes 1982 43.89506 13
Osa03LNT0196200.1 3 Osa03LNG0196200 2394401-2394986 intergenetic lncRNA (lincRNA) 586 46.24573 1
Osa03LNT0196400.1 3 Osa03LNG0196400 2396768-2400551 long non-coding(lnc) isoforms of known genes 1976 44.98988 9
Osa03LNT0469200.1 3 Osa03LNG0469200 24004076-24004319 intergenetic lncRNA (lincRNA) 244 26.22951 1
Osa03LNT0469300.1 3 Osa03LNG0469300 24059001-24059257 intergenetic lncRNA (lincRNA) 257 29.57198 1
Osa03LNT0469500.1 3 Osa03LNG0469500 24153313-24153601 intergenetic lncRNA (lincRNA) 289 23.52941 1
Osa03LNT0469400.1 3 Osa03LNG0469400 24153313-24153601 intergenetic lncRNA (lincRNA) 289 23.52941 1
Osa03LNT0225100.1 3 Osa03LNG0225100 24174255-24180467 long non-coding(lnc) isoforms of known genes 2117 50.21256 7
Osa03LNT0469700.1 3 Osa03LNG0469700 24205061-24205316 intergenetic lncRNA (lincRNA) 256 28.125 1
Osa03LNT0469600.1 3 Osa03LNG0469600 24205061-24205316 intergenetic lncRNA (lincRNA) 256 28.125 1
Osa03LNT0225200.1 3 Osa03LNG0225200 24271558-24277899 long non-coding(lnc) isoforms of known genes 2087 60.18208 7