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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0420700.1 8 Osa08LNG0420700 25799141-25803757 long non-coding(lnc) isoforms of known genes 1635 46.05505 15
Osa08LNT0420800.1 8 Osa08LNG0420800 25870837-25877678 long non-coding(lnc) isoforms of known genes 3939 46.10307 13
Osa08LNT0421000.1 8 Osa08LNG0421000 25893657-25900342 long non-coding(lnc) isoforms of known genes 2299 48.62984 18
Osa08LNT0420900.1 8 Osa08LNG0420900 25934546-25935169 intergenetic lncRNA (lincRNA) 541 55.63771 2
Osa08LNT0421100.1 8 Osa08LNG0421100 25952986-25954735 long non-coding(lnc) isoforms of known genes 1271 54.68135 4
Osa08LNT0557700.1 8 Osa08LNG0557700 26050036-26050267 intergenetic lncRNA (lincRNA) 232 26.72414 1
Osa08LNT0398100.1 8 Osa08LNG0398100 2611007-2616009 intergenetic lncRNA (lincRNA) 1435 43.48432 4
Osa08LNT0421200.1 8 Osa08LNG0421200 26153708-26158598 sense lncRNA 2884 46.42857 3
Osa08LNT0421300.1 8 Osa08LNG0421300 26189660-26192057 long non-coding(lnc) isoforms of known genes 1229 46.86737 6
Osa08LNT0421500.1 8 Osa08LNG0421500 26233694-26238491 long non-coding(lnc) isoforms of known genes 3893 47.18726 3
Osa08LNT0421400.1 8 Osa08LNG0421400 26241056-26242606 intergenetic lncRNA (lincRNA) 1551 41.5216 1
Osa08LNT0421600.1 8 Osa08LNG0421600 26251803-26256814 long non-coding(lnc) isoforms of known genes 3479 46.47887 3
Osa08LNT0421700.1 8 Osa08LNG0421700 26263392-26268090 long non-coding(lnc) isoforms of known genes 3594 47.32888 2
Osa08LNT0395000.1 8 Osa08LNG0395000 26273-33488 long non-coding(lnc) isoforms of known genes 3011 47.82464 8
Osa08LNT0421800.1 8 Osa08LNG0421800 26282948-26285904 long non-coding(lnc) isoforms of known genes 2810 43.80783 2
Osa08LNT0557800.1 8 Osa08LNG0557800 26378532-26378743 intergenetic lncRNA (lincRNA) 212 25.4717 1
Osa08LNT0421900.1 8 Osa08LNG0421900 26430755-26433043 sense lncRNA 1100 51.27273 3
Osa08LNT0421900.2 8 Osa08LNG0421900 26430755-26433043 sense lncRNA 1756 45.89977 3
Osa08LNT0422000.1 8 Osa08LNG0422000 26554192-26557021 long non-coding(lnc) isoforms of known genes 2202 46.59401 2
Osa08LNT0422300.1 8 Osa08LNG0422300 26707901-26712480 long non-coding(lnc) isoforms of known genes 1809 46.82145 6
Osa08LNT0557900.1 8 Osa08LNG0557900 26735826-26736054 intergenetic lncRNA (lincRNA) 229 37.1179 1
Osa08LNT0422100.1 8 Osa08LNG0422100 26744957-26748219 long non-coding(lnc) isoforms of known genes 2814 44.38522 4
Osa08LNT0422200.1 8 Osa08LNG0422200 26756338-26756886 intergenetic lncRNA (lincRNA) 549 56.8306 1
Osa08LNT0422400.1 8 Osa08LNG0422400 26887457-26887658 intergenetic lncRNA (lincRNA) 202 71.78218 1
Osa08LNT0422500.1 8 Osa08LNG0422500 26929495-26931886 intergenetic lncRNA (lincRNA) 1538 44.08322 5
Osa08LNT0422600.1 8 Osa08LNG0422600 27062916-27064362 intergenetic lncRNA (lincRNA) 1221 44.88124 2
Osa08LNT0422600.2 8 Osa08LNG0422600 27062916-27064362 intergenetic lncRNA (lincRNA) 723 49.51591 3
Osa08LNT0422700.1 8 Osa08LNG0422700 27123639-27127540 long non-coding(lnc) isoforms of known genes 1849 44.6728 13
Osa08LNT0422800.1 8 Osa08LNG0422800 27210576-27217016 long non-coding(lnc) isoforms of known genes 3030 49.60396 16
Osa08LNT0558000.1 8 Osa08LNG0558000 27300802-27301058 intergenetic lncRNA (lincRNA) 257 27.62646 1
Osa08LNT0422900.2 8 Osa08LNG0422900 27356438-27358774 long non-coding(lnc) isoforms of known genes 1519 58.85451 2
Osa08LNT0422900.1 8 Osa08LNG0422900 27356438-27358774 long non-coding(lnc) isoforms of known genes 1931 48.88659 3
Osa08LNT0423000.1 8 Osa08LNG0423000 27372908-27375513 intergenetic lncRNA (lincRNA) 1760 46.42045 4
Osa08LNT0423000.2 8 Osa08LNG0423000 27372908-27375513 intergenetic lncRNA (lincRNA) 1727 46.61262 3
Osa08LNT0423300.1 8 Osa08LNG0423300 27435126-27442740 long non-coding(lnc) isoforms of known genes 3379 46.49305 14
Osa08LNT0423100.1 8 Osa08LNG0423100 27457339-27460106 sense lncRNA 2680 54.47761 2
Osa08LNT0423200.1 8 Osa08LNG0423200 27486398-27493091 long non-coding(lnc) isoforms of known genes 2792 45.45129 3
Osa08LNT0423400.1 8 Osa08LNG0423400 27519470-27520001 Antisense lncRNA 420 61.90476 2
Osa08LNT0423500.1 8 Osa08LNG0423500 27548041-27549173 intergenetic lncRNA (lincRNA) 1133 58.78199 1
Osa08LNT0423600.1 8 Osa08LNG0423600 27629503-27631037 sense lncRNA 1457 48.66163 2
Osa08LNT0423700.2 8 Osa08LNG0423700 27644016-27648449 sense lncRNA 887 41.48816 2
Osa08LNT0423700.1 8 Osa08LNG0423700 27644016-27648449 sense lncRNA 242 54.54545 2
Osa08LNT0558100.1 8 Osa08LNG0558100 27760818-27761049 intergenetic lncRNA (lincRNA) 232 28.01724 1
Osa08LNT0423800.1 8 Osa08LNG0423800 27825033-27830293 long non-coding(lnc) isoforms of known genes 2545 47.42633 10
Osa08LNT0423900.2 8 Osa08LNG0423900 27859063-27868317 long non-coding(lnc) isoforms of known genes 3967 43.83665 18
Osa08LNT0423900.1 8 Osa08LNG0423900 27859063-27868317 long non-coding(lnc) isoforms of known genes 3051 46.11603 19
Osa08LNT0398400.1 8 Osa08LNG0398400 2786227-2792182 long non-coding(lnc) isoforms of known genes 2269 45.13001 14
Osa08LNT0424100.1 8 Osa08LNG0424100 27942714-27948818 long non-coding(lnc) isoforms of known genes 3358 48.0941 23
Osa08LNT0424000.1 8 Osa08LNG0424000 27968355-27970704 long non-coding(lnc) isoforms of known genes 1178 46.60441 2
Osa08LNT0424200.1 8 Osa08LNG0424200 28059345-28061198 long non-coding(lnc) isoforms of known genes 1600 52.625 2