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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0196700.1 3 Osa03LNG0196700 2543680-2546338 long non-coding(lnc) isoforms of known genes 965 50.67358 5
Osa03LNT0226400.2 3 Osa03LNG0226400 25517644-25519926 intergenetic lncRNA (lincRNA) 1183 44.12511 9
Osa03LNT0226400.1 3 Osa03LNG0226400 25517644-25519926 intergenetic lncRNA (lincRNA) 1450 41.86207 8
Osa03LNT0226500.3 3 Osa03LNG0226500 25520279-25525325 long non-coding(lnc) isoforms of known genes 2176 43.97978 12
Osa03LNT0226500.2 3 Osa03LNG0226500 25520279-25525325 long non-coding(lnc) isoforms of known genes 1509 48.31014 13
Osa03LNT0226500.1 3 Osa03LNG0226500 25520279-25525325 long non-coding(lnc) isoforms of known genes 1558 47.8819 14
Osa03LNT0470600.1 3 Osa03LNG0470600 25611407-25611683 intergenetic lncRNA (lincRNA) 277 24.90975 1
Osa03LNT0470700.1 3 Osa03LNG0470700 25611407-25611683 intergenetic lncRNA (lincRNA) 277 24.90975 1
Osa03LNT0470900.1 3 Osa03LNG0470900 25740742-25741026 intergenetic lncRNA (lincRNA) 285 27.01754 1
Osa03LNT0470800.1 3 Osa03LNG0470800 25740742-25741026 intergenetic lncRNA (lincRNA) 285 27.01754 1
Osa03LNT0471000.1 3 Osa03LNG0471000 25902893-25903100 intergenetic lncRNA (lincRNA) 208 48.55769 1
Osa03LNT0226600.2 3 Osa03LNG0226600 26135889-26138165 intergenetic lncRNA (lincRNA) 1147 47.34089 3
Osa03LNT0226600.1 3 Osa03LNG0226600 26135889-26138165 intergenetic lncRNA (lincRNA) 1998 40.89089 2
Osa03LNT0226700.1 3 Osa03LNG0226700 26207742-26211666 long non-coding(lnc) isoforms of known genes 1980 48.33333 9
Osa03LNT0226800.1 3 Osa03LNG0226800 26249023-26251894 long non-coding(lnc) isoforms of known genes 2663 43.07172 3
Osa03LNT0226900.1 3 Osa03LNG0226900 26290118-26290327 intronic lncRNA 210 26.19048 1
Osa03LNT0227000.1 3 Osa03LNG0227000 26293298-26298494 long non-coding(lnc) isoforms of known genes 1684 49.40618 10
Osa03LNT0193200.1 3 Osa03LNG0193200 262986-265742 intergenetic lncRNA (lincRNA) 2671 37.88843 2
Osa03LNT0227100.1 3 Osa03LNG0227100 26308523-26312879 long non-coding(lnc) isoforms of known genes 632 51.42405 4
Osa03LNT0227300.1 3 Osa03LNG0227300 26380755-26385440 long non-coding(lnc) isoforms of known genes 2120 47.21698 12
Osa03LNT0227200.1 3 Osa03LNG0227200 26396424-26397374 long non-coding(lnc) isoforms of known genes 767 63.88527 3
Osa03LNT0471100.1 3 Osa03LNG0471100 26411915-26412128 intergenetic lncRNA (lincRNA) 214 58.41121 1
Osa03LNT0227400.1 3 Osa03LNG0227400 26445311-26448758 long non-coding(lnc) isoforms of known genes 1652 45.52058 10
Osa03LNT0227600.1 3 Osa03LNG0227600 26541625-26542523 long non-coding(lnc) isoforms of known genes 807 56.00991 2
Osa03LNT0227500.1 3 Osa03LNG0227500 26543069-26543598 intergenetic lncRNA (lincRNA) 530 61.50943 1