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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0031400.2 1 Osa01LNG0031400 27303264-27312183 long non-coding(lnc) isoforms of known genes 2116 45.08507 7
Osa01LNT0031300.1 1 Osa01LNG0031300 27317361-27320817 sense lncRNA 2231 45.27118 2
Osa01LNT0460300.1 1 Osa01LNG0460300 27331225-27331426 intergenetic lncRNA (lincRNA) 202 53.46535 1
Osa01LNT0031500.1 1 Osa01LNG0031500 27388819-27390875 long non-coding(lnc) isoforms of known genes 1607 41.63037 3
Osa01LNT0460400.1 1 Osa01LNG0460400 27497162-27497364 intergenetic lncRNA (lincRNA) 203 24.13793 1
Osa01LNT0031600.1 1 Osa01LNG0031600 27556072-27557521 sense lncRNA 1339 50.33607 2
Osa01LNT0031700.1 1 Osa01LNG0031700 27623492-27624044 intergenetic lncRNA (lincRNA) 553 41.22966 1
Osa01LNT0031800.1 1 Osa01LNG0031800 27677194-27681367 long non-coding(lnc) isoforms of known genes 2269 45.7911 11
Osa01LNT0031900.1 1 Osa01LNG0031900 27681933-27685673 long non-coding(lnc) isoforms of known genes 1836 53.54031 9
Osa01LNT0032100.1 1 Osa01LNG0032100 27693780-27695908 long non-coding(lnc) isoforms of known genes 1353 40.87214 3
Osa01LNT0032000.1 1 Osa01LNG0032000 27710724-27711973 intergenetic lncRNA (lincRNA) 1250 60.56 1
Osa01LNT0460500.1 1 Osa01LNG0460500 27712374-27712640 intergenetic lncRNA (lincRNA) 267 24.34457 1
Osa01LNT0460600.1 1 Osa01LNG0460600 27712374-27712640 intergenetic lncRNA (lincRNA) 267 24.34457 1
Osa01LNT0003200.1 1 Osa01LNG0003200 2785336-2785538 intronic lncRNA 203 34.97537 1
Osa01LNT0032400.1 1 Osa01LNG0032400 27906702-27920895 long non-coding(lnc) isoforms of known genes 3758 41.405 24
Osa01LNT0032200.1 1 Osa01LNG0032200 27924913-27928433 long non-coding(lnc) isoforms of known genes 1074 48.1378 9
Osa01LNT0032300.1 1 Osa01LNG0032300 27934078-27935051 intergenetic lncRNA (lincRNA) 974 56.77618 1
Osa01LNT0032500.1 1 Osa01LNG0032500 28070715-28076380 long non-coding(lnc) isoforms of known genes 2088 43.53448 10
Osa01LNT0032600.1 1 Osa01LNG0032600 28118062-28123359 sense lncRNA 2891 48.08025 7
Osa01LNT0032700.1 1 Osa01LNG0032700 28153792-28154505 intergenetic lncRNA (lincRNA) 714 42.85714 1
Osa01LNT0032800.1 1 Osa01LNG0032800 28235071-28238556 long non-coding(lnc) isoforms of known genes 2857 48.58243 6
Osa01LNT0032900.1 1 Osa01LNG0032900 28261273-28273168 long non-coding(lnc) isoforms of known genes 4366 47.34311 21
Osa01LNT0033000.1 1 Osa01LNG0033000 28325469-28328168 long non-coding(lnc) isoforms of known genes 1275 49.01961 8
Osa01LNT0003300.1 1 Osa01LNG0003300 2838057-2857964 sense lncRNA 356 62.92135 3
Osa01LNT0033100.2 1 Osa01LNG0033100 28482997-28503332 long non-coding(lnc) isoforms of known genes 2327 57.79974 5