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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0403700.1 8 Osa08LNG0403700 7981383-7988196 Antisense lncRNA 865 47.86127 3
Osa08LNT0548500.1 8 Osa08LNG0548500 8004261-8004537 intergenetic lncRNA (lincRNA) 277 25.63177 1
Osa08LNT0548600.1 8 Osa08LNG0548600 8004261-8004537 intergenetic lncRNA (lincRNA) 277 25.63177 1
Osa08LNT0403800.1 8 Osa08LNG0403800 8011502-8014326 long non-coding(lnc) isoforms of known genes 925 48.43243 3
Osa08LNT0403900.1 8 Osa08LNG0403900 8018575-8021584 long non-coding(lnc) isoforms of known genes 1986 41.08761 4
Osa08LNT0404100.1 8 Osa08LNG0404100 8070510-8070928 intergenetic lncRNA (lincRNA) 419 50.358 1
Osa08LNT0404000.1 8 Osa08LNG0404000 8070510-8070928 intergenetic lncRNA (lincRNA) 419 50.358 1
Osa08LNT0404300.1 8 Osa08LNG0404300 8107778-8120243 long non-coding(lnc) isoforms of known genes 4717 44.94382 14
Osa08LNT0404200.1 8 Osa08LNG0404200 8147380-8148729 long non-coding(lnc) isoforms of known genes 919 49.83678 3
Osa08LNT0404500.1 8 Osa08LNG0404500 8172756-8177396 sense lncRNA 3737 39.65748 2
Osa08LNT0404500.2 8 Osa08LNG0404500 8172756-8177396 sense lncRNA 2218 43.50766 4
Osa08LNT0404400.1 8 Osa08LNG0404400 8182363-8182732 intergenetic lncRNA (lincRNA) 370 63.24324 1
Osa08LNT0548800.1 8 Osa08LNG0548800 8211345-8211619 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0548700.1 8 Osa08LNG0548700 8211345-8211619 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0548900.1 8 Osa08LNG0548900 8225436-8225649 intergenetic lncRNA (lincRNA) 214 26.16822 1
Osa08LNT0549000.1 8 Osa08LNG0549000 8225437-8225649 intergenetic lncRNA (lincRNA) 213 26.29108 1
Osa08LNT0404600.1 8 Osa08LNG0404600 8335742-8339610 long non-coding(lnc) isoforms of known genes 1293 51.04408 7
Osa08LNT0404800.1 8 Osa08LNG0404800 8342253-8346555 long non-coding(lnc) isoforms of known genes 2435 48.9117 5
Osa08LNT0404800.2 8 Osa08LNG0404800 8342253-8346555 long non-coding(lnc) isoforms of known genes 2213 49.29959 7
Osa08LNT0404700.1 8 Osa08LNG0404700 8351872-8352124 intergenetic lncRNA (lincRNA) 253 51.3834 1
Osa08LNT0405000.1 8 Osa08LNG0405000 8415405-8417869 long non-coding(lnc) isoforms of known genes 1227 48.41076 7
Osa08LNT0404900.1 8 Osa08LNG0404900 8497338-8500144 long non-coding(lnc) isoforms of known genes 1384 57.4422 5
Osa08LNT0405100.1 8 Osa08LNG0405100 8657885-8658139 intergenetic lncRNA (lincRNA) 255 62.7451 1
Osa08LNT0405200.1 8 Osa08LNG0405200 8669224-8672734 long non-coding(lnc) isoforms of known genes 1069 50.5145 10
Osa08LNT0405300.1 8 Osa08LNG0405300 8789402-8792448 long non-coding(lnc) isoforms of known genes 2257 43.24324 3
Osa08LNT0405400.1 8 Osa08LNG0405400 8811775-8816691 long non-coding(lnc) isoforms of known genes 2402 43.79684 11
Osa08LNT0405500.1 8 Osa08LNG0405500 8879953-8888069 long non-coding(lnc) isoforms of known genes 2814 48.86283 14
Osa08LNT0396100.1 8 Osa08LNG0396100 888548-889168 intergenetic lncRNA (lincRNA) 621 47.02093 1
Osa08LNT0549100.1 8 Osa08LNG0549100 8895138-8895368 intergenetic lncRNA (lincRNA) 231 38.52814 1
Osa08LNT0405600.1 8 Osa08LNG0405600 8904139-8908891 intergenetic lncRNA (lincRNA) 2311 44.43964 2
Osa08LNT0549200.1 8 Osa08LNG0549200 8936347-8936549 intergenetic lncRNA (lincRNA) 203 41.37931 1
Osa08LNT0549300.1 8 Osa08LNG0549300 8998476-8998730 intergenetic lncRNA (lincRNA) 255 27.05882 1
Osa08LNT0405700.1 8 Osa08LNG0405700 9128338-9134701 sense lncRNA 1497 41.88377 12
Osa08LNT0405800.2 8 Osa08LNG0405800 9224375-9228416 long non-coding(lnc) isoforms of known genes 3275 58.96183 4
Osa08LNT0405800.1 8 Osa08LNG0405800 9224375-9228416 long non-coding(lnc) isoforms of known genes 2845 56.52021 4
Osa08LNT0405900.1 8 Osa08LNG0405900 9282406-9284592 intergenetic lncRNA (lincRNA) 2187 37.44856 1
Osa08LNT0406000.1 8 Osa08LNG0406000 9433370-9433999 intergenetic lncRNA (lincRNA) 405 42.71605 2
Osa08LNT0549400.1 8 Osa08LNG0549400 9435173-9435394 intergenetic lncRNA (lincRNA) 222 27.92793 1
Osa08LNT0406100.1 8 Osa08LNG0406100 9451678-9452424 intergenetic lncRNA (lincRNA) 496 38.10484 2
Osa08LNT0406300.1 8 Osa08LNG0406300 9477451-9482623 long non-coding(lnc) isoforms of known genes 1801 50.91616 10
Osa08LNT0406300.2 8 Osa08LNG0406300 9477451-9482623 long non-coding(lnc) isoforms of known genes 3736 42.58565 7
Osa08LNT0406200.1 8 Osa08LNG0406200 9487779-9491808 intergenetic lncRNA (lincRNA) 1556 42.86632 3
Osa08LNT0396200.1 8 Osa08LNG0396200 956250-958711 long non-coding(lnc) isoforms of known genes 958 53.02714 5
Osa08LNT0549600.1 8 Osa08LNG0549600 9712560-9712831 intergenetic lncRNA (lincRNA) 272 28.67647 1
Osa08LNT0549500.1 8 Osa08LNG0549500 9712560-9712831 intergenetic lncRNA (lincRNA) 272 28.67647 1
Osa08LNT0549700.1 8 Osa08LNG0549700 9910776-9911047 intergenetic lncRNA (lincRNA) 272 26.10294 1
Osa08LNT0549800.1 8 Osa08LNG0549800 9910776-9911047 intergenetic lncRNA (lincRNA) 272 26.10294 1
Osa08LNT0550000.1 8 Osa08LNG0550000 9912033-9912307 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0549900.1 8 Osa08LNG0549900 9912033-9912307 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0550100.1 8 Osa08LNG0550100 9929896-9930170 intergenetic lncRNA (lincRNA) 275 28.36364 1