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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0449200.3 9 Osa09LNG0449200 21347264-21350949 long non-coding(lnc) isoforms of known genes 1955 50.38363 10
Osa09LNT0449200.4 9 Osa09LNG0449200 21347264-21350949 long non-coding(lnc) isoforms of known genes 1953 48.54071 10
Osa09LNT0449200.5 9 Osa09LNG0449200 21347264-21350949 long non-coding(lnc) isoforms of known genes 2333 51.56451 9
Osa09LNT0449200.2 9 Osa09LNG0449200 21347264-21350949 long non-coding(lnc) isoforms of known genes 2457 47.57835 9
Osa09LNT0449300.1 9 Osa09LNG0449300 21354818-21357810 long non-coding(lnc) isoforms of known genes 1165 54.07725 5
Osa09LNT0427100.1 9 Osa09LNG0427100 2136068-2137010 intergenetic lncRNA (lincRNA) 943 49.31071 1
Osa09LNT0583200.1 9 Osa09LNG0583200 21446878-21447133 intergenetic lncRNA (lincRNA) 256 27.73438 1
Osa09LNT0426100.1 9 Osa09LNG0426100 21493-30221 sense lncRNA 801 64.29463 2
Osa09LNT0449400.1 9 Osa09LNG0449400 21550457-21559163 long non-coding(lnc) isoforms of known genes 730 55.06849 2
Osa09LNT0449500.1 9 Osa09LNG0449500 21686098-21688723 long non-coding(lnc) isoforms of known genes 2049 43.09419 3
Osa09LNT0449600.1 9 Osa09LNG0449600 21745610-21746804 sense lncRNA 757 63.01189 2
Osa09LNT0583300.1 9 Osa09LNG0583300 21748629-21748865 intergenetic lncRNA (lincRNA) 237 31.64557 1
Osa09LNT0449700.1 9 Osa09LNG0449700 21771414-21778020 long non-coding(lnc) isoforms of known genes 2512 57.20541 8
Osa09LNT0427200.2 9 Osa09LNG0427200 2181697-2187405 long non-coding(lnc) isoforms of known genes 1882 47.55579 6
Osa09LNT0427200.1 9 Osa09LNG0427200 2181697-2187405 long non-coding(lnc) isoforms of known genes 2153 45.75012 5
Osa09LNT0449800.1 9 Osa09LNG0449800 21868631-21877762 long non-coding(lnc) isoforms of known genes 4109 44.22 25
Osa09LNT0449900.1 9 Osa09LNG0449900 21922941-21926057 long non-coding(lnc) isoforms of known genes 1233 50.28386 7
Osa09LNT0450000.1 9 Osa09LNG0450000 21949057-21952372 long non-coding(lnc) isoforms of known genes 1558 47.36842 6
Osa09LNT0450100.2 9 Osa09LNG0450100 22107352-22113414 long non-coding(lnc) isoforms of known genes 1888 43.9089 13
Osa09LNT0450100.1 9 Osa09LNG0450100 22107352-22113414 long non-coding(lnc) isoforms of known genes 1804 44.56763 14
Osa09LNT0450200.2 9 Osa09LNG0450200 22114202-22119961 long non-coding(lnc) isoforms of known genes 3001 44.58514 9
Osa09LNT0450200.1 9 Osa09LNG0450200 22114202-22119961 long non-coding(lnc) isoforms of known genes 2221 47.23098 9
Osa09LNT0450300.1 9 Osa09LNG0450300 22173736-22178247 long non-coding(lnc) isoforms of known genes 1545 50.03236 12
Osa09LNT0450400.1 9 Osa09LNG0450400 22207649-22208631 sense lncRNA 931 52.63158 2
Osa09LNT0450500.1 9 Osa09LNG0450500 22248966-22254366 long non-coding(lnc) isoforms of known genes 3085 45.73744 9
Osa09LNT0427300.1 9 Osa09LNG0427300 2226146-2227970 intergenetic lncRNA (lincRNA) 1681 47.29328 2
Osa09LNT0450600.1 9 Osa09LNG0450600 22287181-22291728 long non-coding(lnc) isoforms of known genes 1602 51.06117 7
Osa09LNT0450700.1 9 Osa09LNG0450700 22367879-22373612 long non-coding(lnc) isoforms of known genes 3277 46.71956 9
Osa09LNT0450900.1 9 Osa09LNG0450900 22405509-22414370 long non-coding(lnc) isoforms of known genes 2114 46.07379 11
Osa09LNT0450900.2 9 Osa09LNG0450900 22405509-22414370 long non-coding(lnc) isoforms of known genes 4230 39.64539 10
Osa09LNT0450800.1 9 Osa09LNG0450800 22459240-22461831 sense lncRNA 2111 42.16011 4
Osa09LNT0451000.1 9 Osa09LNG0451000 22507944-22510456 long non-coding(lnc) isoforms of known genes 1574 44.53621 10
Osa09LNT0451100.1 9 Osa09LNG0451100 22631214-22633487 long non-coding(lnc) isoforms of known genes 1600 53.0 3
Osa09LNT0451200.1 9 Osa09LNG0451200 22701807-22703104 long non-coding(lnc) isoforms of known genes 507 53.84615 4
Osa09LNT0451300.1 9 Osa09LNG0451300 22793297-22797763 long non-coding(lnc) isoforms of known genes 1893 50.23772 5
Osa09LNT0451400.1 9 Osa09LNG0451400 22811278-22814067 long non-coding(lnc) isoforms of known genes 2096 47.1374 6
Osa09LNT0451500.2 9 Osa09LNG0451500 22883138-22887559 long non-coding(lnc) isoforms of known genes 2430 49.71193 6
Osa09LNT0451500.1 9 Osa09LNG0451500 22883138-22887559 long non-coding(lnc) isoforms of known genes 2520 49.00794 5
Osa09LNT0452000.1 9 Osa09LNG0452000 22911567-22917101 long non-coding(lnc) isoforms of known genes 2513 47.59252 16
Osa09LNT0452100.1 9 Osa09LNG0452100 22925577-22928730 long non-coding(lnc) isoforms of known genes 1349 46.62713 5
Osa09LNT0577200.1 9 Osa09LNG0577200 2314508-2314783 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa09LNT0577300.1 9 Osa09LNG0577300 2314508-2314783 intergenetic lncRNA (lincRNA) 276 26.44928 1
Osa09LNT0427400.1 9 Osa09LNG0427400 2320603-2322676 long non-coding(lnc) isoforms of known genes 1921 42.79021 2
Osa09LNT0427500.1 9 Osa09LNG0427500 2335658-2349605 long non-coding(lnc) isoforms of known genes 1247 38.01123 3
Osa09LNT0427700.1 9 Osa09LNG0427700 2357522-2361313 long non-coding(lnc) isoforms of known genes 2598 45.34257 3
Osa09LNT0427600.1 9 Osa09LNG0427600 2364663-2370044 long non-coding(lnc) isoforms of known genes 1100 52.09091 5
Osa09LNT0577500.1 9 Osa09LNG0577500 2393516-2393787 intergenetic lncRNA (lincRNA) 272 25.73529 1
Osa09LNT0577400.1 9 Osa09LNG0577400 2393516-2393787 intergenetic lncRNA (lincRNA) 272 25.73529 1
Osa09LNT0427800.2 9 Osa09LNG0427800 2396780-2400017 long non-coding(lnc) isoforms of known genes 2906 33.0351 3
Osa09LNT0427800.3 9 Osa09LNG0427800 2396780-2400017 long non-coding(lnc) isoforms of known genes 2985 33.16583 2