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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0239600.1 3 Osa03LNG0239600 33447454-33450888 intergenetic lncRNA (lincRNA) 1894 43.98099 2
Osa03LNT0239700.1 3 Osa03LNG0239700 33494125-33500457 long non-coding(lnc) isoforms of known genes 2612 50.80398 12
Osa03LNT0239800.1 3 Osa03LNG0239800 33519844-33521740 intergenetic lncRNA (lincRNA) 1344 47.32143 7
Osa03LNT0239900.1 3 Osa03LNG0239900 33525483-33528162 long non-coding(lnc) isoforms of known genes 1815 47.6584 7
Osa03LNT0240000.2 3 Osa03LNG0240000 33530086-33544590 long non-coding(lnc) isoforms of known genes 6878 40.02617 8
Osa03LNT0240000.1 3 Osa03LNG0240000 33530086-33544590 long non-coding(lnc) isoforms of known genes 8893 42.5953 13
Osa03LNT0240100.2 3 Osa03LNG0240100 33631927-33636593 long non-coding(lnc) isoforms of known genes 2485 44.42656 14
Osa03LNT0240100.1 3 Osa03LNG0240100 33631927-33636593 long non-coding(lnc) isoforms of known genes 2460 44.5935 14
Osa03LNT0240200.1 3 Osa03LNG0240200 33688013-33692305 long non-coding(lnc) isoforms of known genes 1151 48.56646 10
Osa03LNT0472700.1 3 Osa03LNG0472700 33726988-33727215 intergenetic lncRNA (lincRNA) 228 27.63158 1
Osa03LNT0240300.1 3 Osa03LNG0240300 33744048-33749491 long non-coding(lnc) isoforms of known genes 3654 42.14559 7
Osa03LNT0240300.2 3 Osa03LNG0240300 33744048-33749491 long non-coding(lnc) isoforms of known genes 3402 42.5632 8
Osa03LNT0240400.1 3 Osa03LNG0240400 33837942-33841646 long non-coding(lnc) isoforms of known genes 1836 45.9695 5
Osa03LNT0240500.1 3 Osa03LNG0240500 33850137-33855046 long non-coding(lnc) isoforms of known genes 2912 50.34341 12
Osa03LNT0240600.1 3 Osa03LNG0240600 33891972-33894601 long non-coding(lnc) isoforms of known genes 1186 48.14503 6
Osa03LNT0240700.1 3 Osa03LNG0240700 33995633-33998631 long non-coding(lnc) isoforms of known genes 1709 44.00234 6
Osa03LNT0240900.1 3 Osa03LNG0240900 34010918-34024486 long non-coding(lnc) isoforms of known genes 3012 46.44754 27
Osa03LNT0240800.3 3 Osa03LNG0240800 34039038-34045098 intergenetic lncRNA (lincRNA) 1576 36.16751 5
Osa03LNT0240800.2 3 Osa03LNG0240800 34039038-34045098 intergenetic lncRNA (lincRNA) 792 36.4899 3
Osa03LNT0240800.1 3 Osa03LNG0240800 34039038-34045098 intergenetic lncRNA (lincRNA) 1512 36.37566 4
Osa03LNT0472800.1 3 Osa03LNG0472800 34090903-34091175 intergenetic lncRNA (lincRNA) 273 26.37363 1
Osa03LNT0241000.1 3 Osa03LNG0241000 34202464-34206271 long non-coding(lnc) isoforms of known genes 1785 53.44538 6
Osa03LNT0241100.1 3 Osa03LNG0241100 34396969-34400514 long non-coding(lnc) isoforms of known genes 2228 42.50449 6
Osa03LNT0241200.1 3 Osa03LNG0241200 34435026-34438452 long non-coding(lnc) isoforms of known genes 1684 56.05701 4
Osa03LNT0241300.1 3 Osa03LNG0241300 34439368-34444387 long non-coding(lnc) isoforms of known genes 2394 45.36341 7