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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0033100.2 1 Osa01LNG0033100 28482997-28503332 long non-coding(lnc) isoforms of known genes 2327 57.79974 5
Osa01LNT0033200.1 1 Osa01LNG0033200 28541568-28545410 long non-coding(lnc) isoforms of known genes 1620 44.87654 12
Osa01LNT0033200.2 1 Osa01LNG0033200 28541568-28545410 long non-coding(lnc) isoforms of known genes 1844 44.1974 11
Osa01LNT0033200.3 1 Osa01LNG0033200 28541568-28545410 long non-coding(lnc) isoforms of known genes 1610 44.84472 12
Osa01LNT0033400.1 1 Osa01LNG0033400 28583152-28586500 long non-coding(lnc) isoforms of known genes 842 53.44418 5
Osa01LNT0033300.1 1 Osa01LNG0033300 28586762-28587208 intergenetic lncRNA (lincRNA) 447 65.10067 1
Osa01LNT0033500.1 1 Osa01LNG0033500 28657665-28660474 long non-coding(lnc) isoforms of known genes 1286 47.74495 7
Osa01LNT0033600.1 1 Osa01LNG0033600 28675518-28680143 long non-coding(lnc) isoforms of known genes 2214 53.88437 7
Osa01LNT0033700.1 1 Osa01LNG0033700 28683874-28698910 long non-coding(lnc) isoforms of known genes 4824 45.70896 27
Osa01LNT0033800.1 1 Osa01LNG0033800 28786544-28793473 long non-coding(lnc) isoforms of known genes 4057 44.95933 12
Osa01LNT0003400.1 1 Osa01LNG0003400 2892953-2896056 sense lncRNA 2822 51.98441 3
Osa01LNT0033900.1 1 Osa01LNG0033900 29066636-29076338 long non-coding(lnc) isoforms of known genes 4367 42.77536 23
Osa01LNT0034000.1 1 Osa01LNG0034000 29183845-29184972 long non-coding(lnc) isoforms of known genes 1052 59.60076 2
Osa01LNT0034100.1 1 Osa01LNG0034100 29206353-29209606 long non-coding(lnc) isoforms of known genes 2188 48.8574 5
Osa01LNT0034200.1 1 Osa01LNG0034200 29240071-29246823 long non-coding(lnc) isoforms of known genes 1129 47.82994 4
Osa01LNT0034300.2 1 Osa01LNG0034300 29474687-29475915 intergenetic lncRNA (lincRNA) 919 56.80087 3
Osa01LNT0034300.3 1 Osa01LNG0034300 29474687-29475915 intergenetic lncRNA (lincRNA) 800 58.25 3
Osa01LNT0034300.1 1 Osa01LNG0034300 29474687-29475915 intergenetic lncRNA (lincRNA) 1229 53.86493 1
Osa01LNT0034400.1 1 Osa01LNG0034400 29534964-29536139 long non-coding(lnc) isoforms of known genes 974 50.30801 3
Osa01LNT0034500.1 1 Osa01LNG0034500 29598953-29601167 long non-coding(lnc) isoforms of known genes 1209 51.6129 7
Osa01LNT0034800.1 1 Osa01LNG0034800 29652588-29669044 intergenetic lncRNA (lincRNA) 5660 40.31802 34
Osa01LNT0003500.1 1 Osa01LNG0003500 2971130-2980566 long non-coding(lnc) isoforms of known genes 2574 44.67754 18
Osa01LNT0034600.1 1 Osa01LNG0034600 29711819-29717493 intergenetic lncRNA (lincRNA) 642 48.2866 3
Osa01LNT0034600.2 1 Osa01LNG0034600 29711819-29717493 intergenetic lncRNA (lincRNA) 596 44.79866 2
Osa01LNT0034700.1 1 Osa01LNG0034700 29736362-29739447 long non-coding(lnc) isoforms of known genes 1294 50.07728 8