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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0198100.1 3 Osa03LNG0198100 3760652-3762293 long non-coding(lnc) isoforms of known genes 1504 43.94947 2
Osa03LNT0198200.1 3 Osa03LNG0198200 3767753-3771331 long non-coding(lnc) isoforms of known genes 2023 48.83836 6
Osa03LNT0198300.1 3 Osa03LNG0198300 3814379-3823323 long non-coding(lnc) isoforms of known genes 754 54.50928 4
Osa03LNT0198400.1 3 Osa03LNG0198400 3918680-3921239 intergenetic lncRNA (lincRNA) 2218 48.82777 3
Osa03LNT0198500.1 3 Osa03LNG0198500 4002089-4005420 long non-coding(lnc) isoforms of known genes 1098 49.36248 6
Osa03LNT0193500.1 3 Osa03LNG0193500 405717-410093 long non-coding(lnc) isoforms of known genes 1807 44.60432 10
Osa03LNT0198700.1 3 Osa03LNG0198700 4119985-4122323 long non-coding(lnc) isoforms of known genes 1564 44.05371 5
Osa03LNT0198600.1 3 Osa03LNG0198600 4137050-4146632 long non-coding(lnc) isoforms of known genes 913 60.56955 4
Osa03LNT0198800.2 3 Osa03LNG0198800 4217189-4219023 long non-coding(lnc) isoforms of known genes 1474 51.89959 4
Osa03LNT0198800.1 3 Osa03LNG0198800 4217189-4219023 long non-coding(lnc) isoforms of known genes 1325 53.96226 5
Osa03LNT0198900.1 3 Osa03LNG0198900 4384108-4390364 long non-coding(lnc) isoforms of known genes 2158 45.64411 15
Osa03LNT0199000.1 3 Osa03LNG0199000 4407226-4408457 Antisense lncRNA 732 47.13115 6
Osa03LNT0199100.1 3 Osa03LNG0199100 4472110-4476128 long non-coding(lnc) isoforms of known genes 2377 52.7135 5
Osa03LNT0199200.1 3 Osa03LNG0199200 4584427-4585764 sense lncRNA 1258 50.9539 2
Osa03LNT0199300.1 3 Osa03LNG0199300 4682466-4685170 long non-coding(lnc) isoforms of known genes 1514 55.15192 9
Osa03LNT0193600.1 3 Osa03LNG0193600 471470-476757 long non-coding(lnc) isoforms of known genes 1746 47.30813 15
Osa03LNT0199400.1 3 Osa03LNG0199400 4720710-4724059 long non-coding(lnc) isoforms of known genes 2247 46.06142 7
Osa03LNT0199500.2 3 Osa03LNG0199500 4726165-4733998 long non-coding(lnc) isoforms of known genes 4822 43.09415 12
Osa03LNT0199500.1 3 Osa03LNG0199500 4726165-4733998 long non-coding(lnc) isoforms of known genes 3620 45.1105 13
Osa03LNT0199600.1 3 Osa03LNG0199600 4941038-4945558 long non-coding(lnc) isoforms of known genes 2077 43.76505 9
Osa03LNT0199700.1 3 Osa03LNG0199700 4951886-4953948 sense lncRNA 1989 44.09251 2
Osa03LNT0199800.1 3 Osa03LNG0199800 4954143-4955126 long non-coding(lnc) isoforms of known genes 698 43.40974 4
Osa03LNT0199900.1 3 Osa03LNG0199900 4956308-4959448 long non-coding(lnc) isoforms of known genes 1228 62.78502 6
Osa03LNT0463100.1 3 Osa03LNG0463100 5066010-5066271 intergenetic lncRNA (lincRNA) 262 42.74809 1
Osa03LNT0200000.1 3 Osa03LNG0200000 5085634-5090341 long non-coding(lnc) isoforms of known genes 1309 43.62108 8