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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa03LNT0200100.2 3 Osa03LNG0200100 5200218-5206428 long non-coding(lnc) isoforms of known genes 2721 43.80742 8
Osa03LNT0200100.1 3 Osa03LNG0200100 5200218-5206428 long non-coding(lnc) isoforms of known genes 4215 46.66667 12
Osa03LNT0200200.1 3 Osa03LNG0200200 5297336-5301348 long non-coding(lnc) isoforms of known genes 2364 43.99323 12
Osa03LNT0200300.1 3 Osa03LNG0200300 5352944-5357283 long non-coding(lnc) isoforms of known genes 1661 49.48826 8
Osa03LNT0200400.1 3 Osa03LNG0200400 5393933-5396976 long non-coding(lnc) isoforms of known genes 2767 42.82617 3
Osa03LNT0200500.1 3 Osa03LNG0200500 5441845-5444188 long non-coding(lnc) isoforms of known genes 2023 56.79684 4
Osa03LNT0200600.1 3 Osa03LNG0200600 5457946-5458155 Antisense lncRNA 210 49.04762 1
Osa03LNT0200700.1 3 Osa03LNG0200700 5548562-5550621 Antisense lncRNA 291 42.26804 3
Osa03LNT0200800.1 3 Osa03LNG0200800 5573373-5576434 long non-coding(lnc) isoforms of known genes 914 56.67396 6
Osa03LNT0200900.1 3 Osa03LNG0200900 5665269-5665995 intergenetic lncRNA (lincRNA) 727 56.39615 1
Osa03LNT0201000.1 3 Osa03LNG0201000 5692698-5698517 intergenetic lncRNA (lincRNA) 1065 49.67136 3
Osa03LNT0201100.2 3 Osa03LNG0201100 5694578-5697275 intergenetic lncRNA (lincRNA) 595 46.38655 2
Osa03LNT0201100.1 3 Osa03LNG0201100 5694578-5697275 intergenetic lncRNA (lincRNA) 1042 41.07486 2
Osa03LNT0201100.3 3 Osa03LNG0201100 5694578-5697275 intergenetic lncRNA (lincRNA) 1703 49.03112 2
Osa03LNT0201300.3 3 Osa03LNG0201300 5760848-5767440 long non-coding(lnc) isoforms of known genes 3126 46.54511 14
Osa03LNT0201300.2 3 Osa03LNG0201300 5760848-5767440 long non-coding(lnc) isoforms of known genes 3221 46.53834 14
Osa03LNT0201300.1 3 Osa03LNG0201300 5760848-5767440 long non-coding(lnc) isoforms of known genes 3188 46.95734 14
Osa03LNT0201300.5 3 Osa03LNG0201300 5760848-5767440 long non-coding(lnc) isoforms of known genes 3208 46.38404 14
Osa03LNT0201300.4 3 Osa03LNG0201300 5760848-5767440 long non-coding(lnc) isoforms of known genes 3006 47.93746 14
Osa03LNT0201200.1 3 Osa03LNG0201200 5779625-5789221 long non-coding(lnc) isoforms of known genes 4934 46.37211 9
Osa03LNT0201400.1 3 Osa03LNG0201400 5814375-5816687 long non-coding(lnc) isoforms of known genes 1224 44.93464 6
Osa03LNT0201500.1 3 Osa03LNG0201500 5829016-5835122 long non-coding(lnc) isoforms of known genes 3446 45.67615 5
Osa03LNT0201600.1 3 Osa03LNG0201600 5939190-5939701 intergenetic lncRNA (lincRNA) 430 69.76744 2
Osa03LNT0201700.1 3 Osa03LNG0201700 5955407-5960532 long non-coding(lnc) isoforms of known genes 1833 51.82761 14
Osa03LNT0201700.2 3 Osa03LNG0201700 5955407-5960532 long non-coding(lnc) isoforms of known genes 1730 50.92486 15