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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0034700.2 1 Osa01LNG0034700 29736362-29739447 long non-coding(lnc) isoforms of known genes 2114 46.83065 7
Osa01LNT0034700.3 1 Osa01LNG0034700 29736362-29739447 long non-coding(lnc) isoforms of known genes 1280 49.0625 8
Osa01LNT0034700.4 1 Osa01LNG0034700 29736362-29739447 long non-coding(lnc) isoforms of known genes 1743 48.1354 8
Osa01LNT0034900.1 1 Osa01LNG0034900 29770183-29773350 long non-coding(lnc) isoforms of known genes 1357 53.35298 6
Osa01LNT0035000.1 1 Osa01LNG0035000 29842914-29846816 long non-coding(lnc) isoforms of known genes 2921 44.81342 6
Osa01LNT0035000.2 1 Osa01LNG0035000 29842914-29846816 long non-coding(lnc) isoforms of known genes 2237 47.6084 6
Osa01LNT0003600.1 1 Osa01LNG0003600 2986329-2989246 long non-coding(lnc) isoforms of known genes 1563 54.57454 7
Osa01LNT0003600.2 1 Osa01LNG0003600 2986329-2989246 long non-coding(lnc) isoforms of known genes 1573 54.60903 7
Osa01LNT0035100.1 1 Osa01LNG0035100 29967316-29969095 long non-coding(lnc) isoforms of known genes 744 43.8172 6
Osa01LNT0035200.1 1 Osa01LNG0035200 29967611-29969987 long non-coding(lnc) isoforms of known genes 1611 40.90627 3
Osa01LNT0035300.1 1 Osa01LNG0035300 30086355-30088871 sense lncRNA 1122 62.83422 2
Osa01LNT0035400.1 1 Osa01LNG0035400 30219829-30220046 intronic lncRNA 218 27.52294 1
Osa01LNT0035500.1 1 Osa01LNG0035500 30298577-30299371 intergenetic lncRNA (lincRNA) 795 52.45283 1
Osa01LNT0035600.1 1 Osa01LNG0035600 30346421-30349017 long non-coding(lnc) isoforms of known genes 751 60.05326 6
Osa01LNT0035700.1 1 Osa01LNG0035700 30372304-30376349 long non-coding(lnc) isoforms of known genes 1646 41.7983 5
Osa01LNT0035800.1 1 Osa01LNG0035800 30401373-30403740 sense lncRNA 1907 45.30676 2
Osa01LNT0035900.1 1 Osa01LNG0035900 30490728-30497222 sense lncRNA 3981 55.11178 6
Osa01LNT0036000.1 1 Osa01LNG0036000 30593441-30598640 long non-coding(lnc) isoforms of known genes 2747 44.63051 11
Osa01LNT0036000.2 1 Osa01LNG0036000 30593441-30598640 long non-coding(lnc) isoforms of known genes 2793 44.57573 11
Osa01LNT0036100.1 1 Osa01LNG0036100 30628756-30629202 intergenetic lncRNA (lincRNA) 369 62.33062 2
Osa01LNT0036200.1 1 Osa01LNG0036200 30775140-30779230 long non-coding(lnc) isoforms of known genes 2058 46.45287 13
Osa01LNT0036300.1 1 Osa01LNG0036300 30788662-30796676 long non-coding(lnc) isoforms of known genes 2301 45.93655 14
Osa01LNT0460700.1 1 Osa01LNG0460700 30815215-30815469 intergenetic lncRNA (lincRNA) 255 29.41176 1
Osa01LNT0036400.1 1 Osa01LNG0036400 30840199-30845944 sense lncRNA 2687 45.47823 14
Osa01LNT0036400.2 1 Osa01LNG0036400 30840199-30845944 sense lncRNA 2580 45.34884 15