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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0257200.1 4 Osa04LNG0257200 15844587-15853748 long non-coding(lnc) isoforms of known genes 2052 53.26511 10
Osa04LNT0490600.1 4 Osa04LNG0490600 15950613-15950857 intergenetic lncRNA (lincRNA) 245 26.12245 1
Osa04LNT0257300.1 4 Osa04LNG0257300 16057969-16068247 long non-coding(lnc) isoforms of known genes 3544 38.62867 5
Osa04LNT0490700.1 4 Osa04LNG0490700 16073925-16074186 intergenetic lncRNA (lincRNA) 262 40.45802 1
Osa04LNT0490800.1 4 Osa04LNG0490800 16074700-16074944 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa04LNT0257400.1 4 Osa04LNG0257400 16290249-16291628 intergenetic lncRNA (lincRNA) 1380 53.98551 1
Osa04LNT0257700.1 4 Osa04LNG0257700 16349941-16353959 long non-coding(lnc) isoforms of known genes 2106 45.10921 7
Osa04LNT0257700.2 4 Osa04LNG0257700 16349941-16353959 long non-coding(lnc) isoforms of known genes 2161 47.52429 7
Osa04LNT0257500.1 4 Osa04LNG0257500 16367675-16367886 intergenetic lncRNA (lincRNA) 212 53.77358 1
Osa04LNT0257600.1 4 Osa04LNG0257600 16372011-16372480 intergenetic lncRNA (lincRNA) 470 53.40426 1
Osa04LNT0490900.1 4 Osa04LNG0490900 16429556-16429830 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa04LNT0491000.1 4 Osa04LNG0491000 16429556-16429830 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa04LNT0257800.1 4 Osa04LNG0257800 16556958-16557174 intronic lncRNA 217 41.93548 1
Osa04LNT0257900.1 4 Osa04LNG0257900 16637456-16642852 long non-coding(lnc) isoforms of known genes 3772 43.42524 6
Osa04LNT0491100.1 4 Osa04LNG0491100 16683558-16683812 intergenetic lncRNA (lincRNA) 255 28.62745 1
Osa04LNT0247100.1 4 Osa04LNG0247100 1677297-1680389 long non-coding(lnc) isoforms of known genes 741 56.14035 3
Osa04LNT0258000.2 4 Osa04LNG0258000 16843350-16857069 long non-coding(lnc) isoforms of known genes 4437 39.53121 24
Osa04LNT0258000.1 4 Osa04LNG0258000 16843350-16857069 long non-coding(lnc) isoforms of known genes 3663 41.11384 25
Osa04LNT0258300.1 4 Osa04LNG0258300 16863867-16872564 intergenetic lncRNA (lincRNA) 5648 42.19193 11
Osa04LNT0258300.2 4 Osa04LNG0258300 16863867-16872564 intergenetic lncRNA (lincRNA) 4289 41.40825 11
Osa04LNT0491300.1 4 Osa04LNG0491300 16892790-16893018 intergenetic lncRNA (lincRNA) 229 27.51092 1
Osa04LNT0491200.1 4 Osa04LNG0491200 16892790-16893018 intergenetic lncRNA (lincRNA) 229 27.51092 1
Osa04LNT0258100.1 4 Osa04LNG0258100 16900321-16900919 intergenetic lncRNA (lincRNA) 599 56.59432 1
Osa04LNT0491400.1 4 Osa04LNG0491400 16955024-16955235 intergenetic lncRNA (lincRNA) 212 58.49057 1
Osa04LNT0258200.1 4 Osa04LNG0258200 17015497-17016105 intergenetic lncRNA (lincRNA) 609 56.15764 1