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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0260300.1 4 Osa04LNG0260300 19612844-19615470 sense lncRNA 951 58.88538 3
Osa04LNT0493700.1 4 Osa04LNG0493700 19636207-19636481 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa04LNT0493800.1 4 Osa04LNG0493800 19636207-19636481 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa04LNT0260400.1 4 Osa04LNG0260400 19693037-19694280 long non-coding(lnc) isoforms of known genes 839 51.96663 3
Osa04LNT0260500.1 4 Osa04LNG0260500 19695374-19709946 long non-coding(lnc) isoforms of known genes 3917 44.93235 29
Osa04LNT0260500.3 4 Osa04LNG0260500 19695374-19709946 long non-coding(lnc) isoforms of known genes 4013 44.80439 29
Osa04LNT0260500.2 4 Osa04LNG0260500 19695374-19709946 long non-coding(lnc) isoforms of known genes 3146 38.7794 22
Osa04LNT0260600.1 4 Osa04LNG0260600 19835208-19836886 long non-coding(lnc) isoforms of known genes 1543 53.20804 2
Osa04LNT0260700.1 4 Osa04LNG0260700 19851101-19858972 long non-coding(lnc) isoforms of known genes 1929 47.79679 14
Osa04LNT0260800.1 4 Osa04LNG0260800 19987364-19988271 intergenetic lncRNA (lincRNA) 908 50.88106 1
Osa04LNT0261000.1 4 Osa04LNG0261000 20021368-20025141 long non-coding(lnc) isoforms of known genes 2351 41.98214 6
Osa04LNT0260900.1 4 Osa04LNG0260900 20046002-20046917 long non-coding(lnc) isoforms of known genes 818 54.27873 2
Osa04LNT0261100.1 4 Osa04LNG0261100 20117097-20119136 long non-coding(lnc) isoforms of known genes 1270 42.59843 4
Osa04LNT0261100.2 4 Osa04LNG0261100 20117097-20119136 long non-coding(lnc) isoforms of known genes 1786 40.14558 3
Osa04LNT0261200.1 4 Osa04LNG0261200 20143778-20145831 sense lncRNA 1268 63.24921 2
Osa04LNT0261300.1 4 Osa04LNG0261300 20224698-20226415 long non-coding(lnc) isoforms of known genes 664 48.49398 3
Osa04LNT0261400.1 4 Osa04LNG0261400 20240211-20243282 long non-coding(lnc) isoforms of known genes 992 49.69758 9
Osa04LNT0261500.1 4 Osa04LNG0261500 20259518-20261564 sense lncRNA 1828 49.45295 2
Osa04LNT0261600.1 4 Osa04LNG0261600 20310155-20321095 long non-coding(lnc) isoforms of known genes 943 55.99152 7
Osa04LNT0261700.2 4 Osa04LNG0261700 20405745-20410288 long non-coding(lnc) isoforms of known genes 2101 52.54641 9
Osa04LNT0261700.1 4 Osa04LNG0261700 20405745-20410288 long non-coding(lnc) isoforms of known genes 2945 48.14941 8
Osa04LNT0483900.1 4 Osa04LNG0483900 2044895-2045155 intergenetic lncRNA (lincRNA) 261 39.84674 1
Osa04LNT0484000.1 4 Osa04LNG0484000 2045669-2045913 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa04LNT0261800.1 4 Osa04LNG0261800 20549993-20555065 long non-coding(lnc) isoforms of known genes 1818 47.90979 15
Osa04LNT0261900.1 4 Osa04LNG0261900 20661060-20661752 sense lncRNA 693 47.61905 1